RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ZMIZ1Q9ULJ6 1067 aa7.9□□□□□ -1.14
HPS4-206ENST00000439453 IGHV1OR15-9A0A0B4J2B8 117 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 SYT5O00445 386 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 FLRT2O43155 660 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 CREBL2O60519 120 aaPredicted RBP7.9□□□□□ -1.15
HPS4-206ENST00000439453 STX11O75558 287 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 ECDO95905 644 aaPredicted RBP7.9□□□□□ -1.15
HPS4-206ENST00000439453 NRG3P56975 720 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 GSG1LQ6UXU4 331 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 APOOLQ6UXV4 268 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 ASCL5Q7RTU5 278 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 FAM129CQ86XR2 697 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 VRK2Q86Y07 508 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 CFAP206Q8IYR0 622 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 CMTM4Q8IZR5 234 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 KCT2Q8NC54 265 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 TSTD1Q8NFU3 115 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 OR2A12Q8NGT7 310 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 OR52I2Q8NH67 350 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 ZNF671Q8TAW3 534 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 LGALS14Q8TCE9 139 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 ZDHHC1Q8WTX9 485 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 HMGB4Q8WW32 186 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 GCDHQ92947 438 aaPredicted RBP7.9□□□□□ -1.15
HPS4-206ENST00000439453 GLYATL1Q969I3 302 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 C4orf36Q96KX1 117 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 HCAR1Q9BXC0 346 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 GPN1Q9HCN4 374 aaPredicted RBP7.9□□□□□ -1.15
HPS4-206ENST00000439453 TAS2R5Q9NYW4 299 aa7.9□□□□□ -1.15
HPS4-206ENST00000439453 AKAP7Q9P0M2 348 aaPredicted RBP7.9□□□□□ -1.15
HPS4-206ENST00000439453 HMSDA8MTL9 139 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MPTX1A8MV57 137 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 TMPRSS11DO60235 418 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 HOXB1P14653 301 aaPredicted RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 ANXA7P20073 488 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 PTNP21246 168 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MAOBP27338 520 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PTGER1P34995 402 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 DRD3P35462 400 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 LASP1Q14847 261 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 MLC1Q15049 377 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 UBE2NLQ5JXB2 153 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PRAMEF14Q5SWL7 426 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PRAMEF13Q5VWM6 474 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 ZNF626Q68DY1 528 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 GDPD4Q6W3E5 623 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 Q6ZVU0 165 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MCATQ8IVS2 390 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 CDH26Q8IXH8 852 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 GANCQ8TET4 914 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 GHSRQ92847 366 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 LRRC46Q96FV0 321 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 AMDHD1Q96NU7 426 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 IL17FQ96PD4 163 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MS4A8Q9BY19 250 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 ZCCHC2Q9C0B9 1178 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 DUSP15Q9H1R2 295 aaPredicted RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 INPP5EQ9NRR6 644 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MED11Q9P086 117 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 FBXL3Q9UKT7 428 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PCDHGA9Q9Y5G4 932 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 GON4LQ3T8J9 2241 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 CDC42EP2O14613 210 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 SIGLEC5O15389 551 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 SIX6O95475 246 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 ATP1B1P05026 303 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MRPL3P09001 348 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 TYRP1P17643 537 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 OR12D2P58182 307 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 AP3S2P59780 193 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PABPC1L2AQ5JQF8 200 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 DMKNQ6E0U4 476 aaPredicted RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 MBOAT2Q6ZWT7 520 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PAQR7Q86WK9 346 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 OR5M9Q8NGP3 310 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 SETD7Q8WTS6 366 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 THEM6Q8WUY1 208 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 TMEM255BQ8WV15 326 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 RLN3Q8WXF3 142 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 KISS1RQ969F8 398 aaPredicted RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 ZC3H10Q96K80 434 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 CACYBPQ9HB71 228 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 SLC6A20Q9NP91 592 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 EXOSC3Q9NQT5 275 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 KCNE3Q9Y6H6 103 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 CDHR4A6H8M9 788 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 OR5K4A6NMS3 321 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 KHDRBS3O75525 346 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 HPP00738 406 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 MAT2AP31153 395 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 HOXA1P49639 335 aaPredicted RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 ANXA11P50995 505 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 DEFA5Q01523 94 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 PDSS1Q5T2R2 415 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 ZC3H14Q6PJT7 736 aaKnown RBP7.89□□□□□ -1.15
HPS4-206ENST00000439453 NUDT18Q6ZVK8 323 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 GDF7Q7Z4P5 450 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 OR5J2Q8NH18 312 aa7.89□□□□□ -1.15
HPS4-206ENST00000439453 ZG16BQ96DA0 208 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms