RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FRMD8P1Q9BZ68 369 aaPredicted RBP2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 COMMD4Q9H0A8 199 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 POLR3FQ9H1D9 316 aaPredicted RBP2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 TREM1Q9NP99 234 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 KLHL28Q9NXS3 571 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 SLC2A8Q9NY64 477 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 UXTQ9UBK9 157 aaPredicted RBP2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 B4GALT7Q9UBV7 327 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 CDH9Q9ULB4 789 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 CA5BQ9Y2D0 317 aa2.8□□□□□ -1.96
LSM1P1-201ENST00000438629 CCDC180Q9P1Z9 1646 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 PARD3Q8TEW0 1356 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 TRAV26-1A0A087WT03 109 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 A0A1B0GTQ1 180 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RNF222A6NCQ9 220 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 TUBAL3A6NHL2 446 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 IQCF5A8MTL0 148 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 A8MU10 97 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 TNFSF11O14788 317 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CASKO14936 926 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ARPC3O15145 178 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 FCMRO60667 390 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ATP5HO75947 161 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CAPN1P07384 714 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 IDO1P14902 403 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CYP2B6P20813 491 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CPN2P22792 545 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 IGHV1-2P23083 117 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CFL1P23528 166 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CD1BP29016 333 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RRM2P31350 389 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RPL4P36578 427 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RANBP1P43487 201 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CDKN1BP46527 198 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RGRP47804 291 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RGS8P57771 180 aaPredicted RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 POLR2GP62487 172 aaKnown RBP eCLIP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 RPL32P62910 135 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 XIAPP98170 497 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CNTN2Q02246 1040 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 EXOSC2Q13868 293 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 GANABQ14697 944 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CDKN3Q16667 212 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 KLHL40Q2TBA0 621 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 GLYR1Q49A26 553 aaPredicted RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 PTRHD1Q6GMV3 140 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ZSCAN25Q6NSZ9 544 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 TTC23LQ6PF05 361 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 UTS2BQ765I0 119 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 LHFPL4Q7Z7J7 247 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 AKAP14Q86UN6 197 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CDKL3Q8IVW4 592 aaPredicted RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 PRR22Q8IZ63 422 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CSNK1A1LQ8N752 337 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 OR4C5Q8NGB2 326 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 OR8J1Q8NGP2 316 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 OR13F1Q8NGS4 319 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ZNF461Q8TAF7 563 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ADIPOR1Q96A54 375 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ISG20Q96AZ6 181 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 HAVCR1Q96D42 359 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 AKR1E2Q96JD6 320 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 B3GALT6Q96L58 329 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ALS2CR12Q96Q35 445 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CYTH2Q99418 400 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 KIR2DL4Q99706 377 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 NPAS2Q99743 824 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 SELENOSQ9BQE4 189 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 DPH7Q9BTV6 452 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 UPF3BQ9BZI7 483 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 SLITRK2Q9H156 845 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 SMYD3Q9H7B4 428 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 C1orf123Q9NWV4 160 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 PAQR5Q9NXK6 330 aaPredicted RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 Q9UF83 564 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 APOBEC3BQ9UH17 382 aaKnown RBP2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 KLHL21Q9UJP4 597 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 CLEC4EQ9ULY5 219 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 PIGLQ9Y2B2 252 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 KIF25-AS1Q9Y6Z4 181 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ADAMTS9Q9P2N4 1935 aa2.79□□□□□ -1.96
LSM1P1-201ENST00000438629 ANKRD30AQ9BXX3 1397 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 IGLV8-61A0A075B6I0 122 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 PPIAL4CA0A0B4J2A2 164 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 SMCO3A2RU48 225 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 GOLGA8IPA6NC78 632 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 GOLGA8JA6NMD2 632 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 E9PLD3 99 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 GOLGA8TH3BQL2 631 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 RAD51BO15315 384 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 ZNF264O43296 627 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 DNAJB6O75190 326 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 CDH16O75309 829 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 RBBP9O75884 186 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 CLPXO76031 633 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 NOL4O94818 638 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 LY6G6DO95868 133 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 LGI1O95970 557 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 JCHAINP01591 159 aa2.78□□□□□ -1.96
LSM1P1-201ENST00000438629 CRYGCP07315 174 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms