RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LMX1AQ8TE12 382 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 DAZLQ92904 295 aaKnown RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 NMNAT3Q96T66 252 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLC6A7Q99884 636 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ALG12Q9BV10 488 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 VN1R3Q9BXE9 311 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF350Q9GZX5 532 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 PPA2Q9H2U2 334 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLAMF7Q9NQ25 335 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 POLE3Q9NRF9 147 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 THAP10Q9P2Z0 257 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 KCND3Q9UK17 655 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 MEIS3P1A6NDR6 274 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 KDM4EB2RXH2 506 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF878C9JN71 531 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 PLATP00750 562 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 IFNA21P01568 189 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 PRH1P02810 166 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 MLC1Q15049 377 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ARHGAP11BQ3KRB8 267 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 HAGHLQ6PII5 290 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 PRSS45Q7RTY3 260 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 GKN2Q86XP6 184 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 GLB1L2Q8IW92 636 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 TSTD1Q8NFU3 115 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 OR7G2Q8NG99 324 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 OR13C3Q8NGS6 347 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 OR9A4Q8NGU2 314 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 TRIM43Q96BQ3 446 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ST6GAL2Q96JF0 529 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 PDCD1LG2Q9BQ51 273 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 TMEM168Q9H0V1 697 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SPHK1Q9NYA1 384 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 EMC3Q9P0I2 261 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLC6A14Q9UN76 642 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 PLCL2Q9UPR0 1127 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SCN4AP35499 1836 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 A0A1W2PPL8 197 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 DCDC2BA2VCK2 349 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 B8ZZF3 427 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 MEN1O00255 615 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 FFAR1O14842 300 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF208O43345 1280 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 NARSO43776 548 aaKnown RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ITGA5P08648 1049 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 UBL4AP11441 157 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 NFYAP23511 347 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 HTR2AP28223 471 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLC6A9P48067 706 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 S100A10P60903 97 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 DGCR2P98153 550 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 NFATC4Q14934 902 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 RBMS2Q15434 407 aaKnown RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 CD300LDQ6UXZ3 194 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ANKRD33Q7Z3H0 272 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLC43A2Q8N370 569 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLC39A7Q92504 469 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 FAM46BQ96A09 425 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 C20orf85Q9H1P6 137 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 ISG20L2Q9H9L3 353 aaKnown RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 IL20Q9NYY1 176 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 GSKIPQ9P0R6 139 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 KCNN3Q9UGI6 736 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 APOBEC3BQ9UH17 382 aaKnown RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 CBLCQ9ULV8 474 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 C19orf53Q9UNZ5 99 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-205ENST00000438362 SLC6A5Q9Y345 797 aa6.19□□□□□ -1.42
CSDE1-205ENST00000438362 A0A0A6YYD5 115 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 A0A0A6YYJ9 748 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 TCRBV21S2A2A0A5A6 115 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 TSPAN11A1L157 253 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 ZNF736B4DX44 427 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-205ENST00000438362 PEX12O00623 359 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 RGS13O14921 159 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 EIF4EP06730 217 aaKnown RBP6.18□□□□□ -1.42
CSDE1-205ENST00000438362 PCBP4P57723 403 aaKnown RBP6.18□□□□□ -1.42
CSDE1-205ENST00000438362 OR10A3P58181 314 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 DUSP8Q13202 625 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 Q499Y3 187 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 GPR139Q6DWJ6 353 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 WBP2NLQ6ICG8 309 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 STOML3Q8TAV4 291 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 NEK7Q8TDX7 302 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 TGM7Q96PF1 710 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 DCLRE1CQ96SD1 692 aaKnown RBP6.18□□□□□ -1.42
CSDE1-205ENST00000438362 GSX2Q9BZM3 304 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 BCL2L14Q9BZR8 327 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 SLC2A4RGQ9NR83 387 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 KLRF1Q9NZS2 232 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 CPNE7Q9UBL6 633 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 DAPP1Q9UN19 280 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 PIKFYVEQ9Y2I7 2098 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 PLXNB2O15031 1838 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 KIR2DS5A0A0G2JLQ3 304 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 A0A0G2JNG1 304 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 EEF1E1-BLOC1S5C9J1V9 151 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 KIR2DS3K7RE56 304 aa6.18□□□□□ -1.42
CSDE1-205ENST00000438362 RAF1P04049 648 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms