RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 FAIMQ9NVQ4 179 aa5.41□□□□□ -1.54
PNKDP1-201ENST00000435914 DCTN4Q9UJW0 460 aa5.41□□□□□ -1.54
PNKDP1-201ENST00000435914 MGAT4BQ9UQ53 548 aa5.41□□□□□ -1.54
PNKDP1-201ENST00000435914 TMED7Q9Y3B3 224 aa5.41□□□□□ -1.54
PNKDP1-201ENST00000435914 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.41□□□□□ -1.54
PNKDP1-201ENST00000435914 LIPT2A6NK58 231 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 AQP7P3A6NL99 342 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 VWC2LB2RUY7 222 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 TMEM229AB2RXF0 380 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 RGS16O15492 202 aaPredicted RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SSX4O60224 188 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 EIF1BO60739 113 aaKnown RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SNNO75324 88 aaPredicted RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 MRPL33O75394 65 aaKnown RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 GSNP06396 782 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 PGRP06401 933 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 TFPTP0C1Z6 253 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 ZCCHC18P0CG32 403 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 HOXB9P17482 250 aaPredicted RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 CCNA2P20248 432 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 S100A3P33764 101 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 MAGEA8P43361 318 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 POLR2HP52434 150 aaKnown RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 OR2B6P58173 313 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SLC35A1P78382 337 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 VLDLRP98155 873 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 STX3Q13277 289 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 GSTA3Q16772 222 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SWI5Q1ZZU3 235 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 TMEM249Q2WGJ8 235 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 GPAT3Q53EU6 434 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 C6orf52Q5T4I8 152 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 ZNF544Q6NX49 715 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SLC22A25Q6T423 547 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 MAVSQ7Z434 540 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 KIRREL3Q8IZU9 778 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 MUC15Q8N387 334 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 C17orf78Q8N4C9 275 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 ZNF525Q8N782 197 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 TMEM99Q8N816 258 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 VPS37AQ8NEZ2 397 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 C10orf105Q8TEF2 133 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 WDR60Q8WVS4 1066 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 HTRA1Q92743 480 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 ZHX1-C8orf76Q96EF9 292 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 HS6ST2Q96MM7 605 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 ZNF385AQ96PM9 386 aaKnown RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 PANX1Q96RD7 426 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 TNFRSF13CQ96RJ3 184 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SF3B5Q9BWJ5 86 aaKnown RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 NELFAQ9H3P2 528 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 ALG2Q9H553 416 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 PIF1Q9H611 641 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 WDR55Q9H6Y2 383 aaPredicted RBP5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 RLIMQ9NVW2 624 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 PRDM4Q9UKN5 801 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 RAB21Q9UL25 225 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 SLC9A8Q9Y2E8 581 aa5.4□□□□□ -1.54
PNKDP1-201ENST00000435914 CIB4A0PJX0 185 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 FAM234BA2RU67 622 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 CFAP73A6NFT4 308 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 CCT8L1PA6NM43 557 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 A8MV72 311 aaPredicted RBP5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 FTCDNL1E5RQL4 147 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 ATP6V1G2-DDX39BF2Z307 99 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 M0R1B8 84 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 HDAC3O15379 428 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 FRS3O43559 492 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 LY6HO94772 140 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 AKR7A3O95154 331 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 DBIP07108 87 aaKnown RBP5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 GKN3PP0CG01 181 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 BMP2P12643 396 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 PRG2P13727 222 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 IL7RP16871 459 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 EPHA3P29320 983 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 MPGP29372 298 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 CHI3L1P36222 383 aaPredicted RBP5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 NUDT6P53370 316 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 NME5P56597 212 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 DSCR9P59020 149 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 HPCAP84074 193 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 EGR4Q05215 589 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 LGALS3BPQ08380 585 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 LRRC74AQ0VAA2 488 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 CEACAM7Q14002 265 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 GTDC1Q4AE62 458 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 PDCD4Q53EL6 469 aaKnown RBP5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 OTUD3Q5T2D3 398 aaPredicted RBP5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 RNF220Q5VTB9 566 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 C9orf135Q5VTT2 229 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 KLHL17Q6TDP4 642 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 CASP12Q6UXS9 341 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 ZNF836Q6ZNA1 936 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 ZNF621Q6ZSS3 439 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 CREB3L2Q70SY1 520 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 LINGO2Q7L985 606 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 SPATA19Q7Z5L4 167 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 VRK2Q86Y07 508 aa5.39□□□□□ -1.55
PNKDP1-201ENST00000435914 EPHX4Q8IUS5 362 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms