RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 TMEM45BQ96B21 275 aa11.83□□□□□ -0.52
LINC00028-201ENST00000435497 ROPN1LQ96C74 230 aa11.83□□□□□ -0.52
LINC00028-201ENST00000435497 ZNF385AQ96PM9 386 aaKnown RBP11.83□□□□□ -0.52
LINC00028-201ENST00000435497 EXOSC3Q9NQT5 275 aaKnown RBP11.83□□□□□ -0.52
LINC00028-201ENST00000435497 POLE3Q9NRF9 147 aa11.83□□□□□ -0.52
LINC00028-201ENST00000435497 EXD2Q9NVH0 621 aa11.83□□□□□ -0.52
LINC00028-201ENST00000435497 SLC17A7Q9P2U7 560 aa11.83□□□□□ -0.52
LINC00028-201ENST00000435497 B9A039 149 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 RNASET2O00584 256 aaKnown RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 ZNF208O43345 1280 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 LILRA1O75019 489 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 SKAP2O75563 359 aaPredicted RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 STAMBPO95630 424 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 WNT11O96014 354 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 CDH2P19022 906 aaPredicted RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 SNRPD2P62316 118 aaKnown RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 TNFAIP8L2Q6P589 184 aaPredicted RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 PAQR6Q6TCH4 344 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 ARFGAP2Q8N6H7 521 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 TMEM99Q8N816 258 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 PMM1Q92871 262 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 PLK3Q9H4B4 646 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 MYOZ1Q9NP98 299 aaPredicted RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 CA10Q9NS85 328 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.82□□□□□ -0.52
LINC00028-201ENST00000435497 PCDHGB4Q9UN71 923 aa11.82□□□□□ -0.52
LINC00028-201ENST00000435497 WIPF1O43516 503 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 OR4A8P0C604 315 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ITGA2P17301 1181 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 UQCRC2P22695 453 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 TACR3P29371 465 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 HTR3AP46098 478 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 POLR2HP52434 150 aaKnown RBP11.81□□□□□ -0.52
LINC00028-201ENST00000435497 EMX2Q04743 252 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 RUNX1T1Q06455 604 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 LGALS3BPQ08380 585 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 EFNB3Q15768 340 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 TBRG1Q3YBR2 411 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ATAD3BQ5T9A4 648 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 SAXO2Q658L1 398 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ANKRD16Q6P6B7 361 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 LINGO2Q7L985 606 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 AAED1Q7RTV5 226 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 SLC46A3Q7Z3Q1 461 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 SPATA19Q7Z5L4 167 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ANKRD46Q86W74 232 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ZCCHC24Q8N2G6 241 aaKnown RBP11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ZNF540Q8NDQ6 660 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 OR9K2Q8NGE7 335 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 OR8J2Q8NGG1 315 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 OR4A15Q8NGL6 344 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 BCL2L2Q92843 193 aaPredicted RBP11.81□□□□□ -0.52
LINC00028-201ENST00000435497 TUBGCP3Q96CW5 907 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 AURKBQ96GD4 344 aaPredicted RBP11.81□□□□□ -0.52
LINC00028-201ENST00000435497 SLC38A2Q96QD8 506 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 ADAM19Q9H013 955 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 SEC61A2Q9H9S3 476 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 MKS1Q9NXB0 559 aa11.81□□□□□ -0.52
LINC00028-201ENST00000435497 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 NR5A2O00482 541 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 TCF21O43680 179 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 AKR7A3O95154 331 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 CPSF4O95639 269 aaKnown RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 LGI1O95970 557 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 AGR2O95994 175 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 IGFBP1P08833 259 aaPredicted RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 TACSTD2P09758 323 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 GIFP27352 417 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 CALCRP30988 508 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 SLC1A3P43003 542 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 IDH3GP51553 393 aaPredicted RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 P2RY4P51582 365 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 NAAAQ02083 359 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 HGFACQ04756 655 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 CEACAM7Q14002 265 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 OTUD3Q5T2D3 398 aaPredicted RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 VHLLQ6RSH7 139 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 KLHL24Q6TFL4 600 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 MEX3DQ86XN8 651 aaKnown RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 POMGNT2Q8NAT1 580 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 OR1K1Q8NGR3 316 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 KATNB1Q9BVA0 655 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 SF3B5Q9BWJ5 86 aaKnown RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 PLA2G12AQ9BZM1 189 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 SLC38A1Q9H2H9 487 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 PPCSQ9HAB8 311 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 OBP2BQ9NPH6 170 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 TMEM45AQ9NWC5 275 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 ASIC5Q9NY37 505 aa11.8□□□□□ -0.52
LINC00028-201ENST00000435497 CRNNQ9UBG3 495 aaPredicted RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 TMEFF2Q9UIK5 374 aaPredicted RBP11.8□□□□□ -0.52
LINC00028-201ENST00000435497 PRSS51A0A1B0GVH4 220 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 TMEM129A0AVI4 362 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms