RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 VRK1Q99986 396 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SLC38A1Q9H2H9 487 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PIGMQ9H3S5 423 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 SEMA4GQ9NTN9 838 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CNTRLQ7Z7A1 2325 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 LOC100509620A0A075B734 347 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 H0YIV9 168 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PRKRAO75569 313 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 LATS1O95835 1130 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 TMIGD3P0DMS9 266 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CORO1AP31146 461 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PPIAP62937 165 aaKnown RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PCGF3Q3KNV8 242 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 DUSP28Q4G0W2 176 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 NCMAPQ5T1S8 102 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CAMKMTQ7Z624 323 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 NUBPLQ8TB37 319 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 PIGXQ8TBF5 258 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 NKX3-1Q99801 234 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 CERS4Q9HA82 394 aa6.91□□□□□ -1.3
CPSF6-202ENST00000435070 GPR55Q9Y2T6 319 aaPredicted RBP6.91□□□□□ -1.3
CPSF6-202ENST00000435070 NPIPB8E9PQR5 432 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 CLDN11O75508 207 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF821O75541 412 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 AQP8O94778 261 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 CSN2P05814 226 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 OR2B8PP59922 312 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF234Q14588 700 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 GPNMBQ14956 572 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 KRBOX4Q5JUW0 171 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 FAM71E1Q6IPT2 247 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 TPRA1Q86W33 373 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 RFLNBQ8N5W9 214 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 SOCS4Q8WXH5 440 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 MAFIPQ8WZ33 124 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 H3BNC9 293 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 GATCO43716 136 aaKnown RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 S100A8P05109 93 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 AKR1A1P14550 325 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 CPN1P15169 458 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ADH6P28332 368 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 GPX4P36969 197 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ZNF280AP59817 542 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 SKP1P63208 163 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 TSPAN31Q12999 210 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 GLT8D1Q68CQ7 371 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 LRRC56Q8IYG6 542 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 SYNPRQ8TBG9 265 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 TIMP4Q99727 224 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 TMEM272A0A1B0GTI8 110 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ERAL1O75616 437 aaKnown RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 IGHA1P01876 353 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 TYRP14679 529 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 RPL17P18621 184 aaKnown RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 HTR2AP28223 471 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 TLX1P31314 330 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 RPL4P36578 427 aaKnown RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 NAA10P41227 235 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ELAVL2Q12926 359 aaKnown RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 ADGRF1Q5T601 910 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 STPG1Q5TH74 334 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 FIGNL1Q6PIW4 674 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 POMZP3Q6PJE2 187 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 MOB3CQ70IA8 216 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 SLC29A4Q7RTT9 530 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 GTPBP8Q8N3Z3 284 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 FAM98AQ8NCA5 519 aaKnown RBP6.9□□□□□ -1.3
CPSF6-202ENST00000435070 SMPDL3AQ92484 453 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 VOPP1Q96AW1 172 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 HRH4Q9H3N8 390 aa6.9□□□□□ -1.3
CPSF6-202ENST00000435070 MCIDASD6RGH6 385 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 OIP5O43482 229 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 GNRH1P01148 92 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 UBBP0CG47 229 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 UBCP0CG48 685 aaKnown RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 CD52P31358 61 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 ATP5C1P36542 298 aaKnown RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 IFNGR2P38484 337 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 RPS27AP62979 156 aaKnown RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 UBA52P62987 128 aaKnown RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 SHC2P98077 582 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 CSRP2Q16527 193 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 SSX9Q7RTT3 188 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 VRK2Q86Y07 508 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 OR2T33Q8NG76 320 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 NAA11Q9BSU3 229 aaPredicted RBP6.9□□□□□ -1.31
CPSF6-202ENST00000435070 GPR174Q9BXC1 333 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 ABRACLQ9P1F3 81 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 FBXO4Q9UKT5 387 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 DTX4Q9Y2E6 619 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 PLEKHA6Q9Y2H5 1048 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 NPFFR2Q9Y5X5 522 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 GABARAPH6UMI1 98 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 WRBO00258 174 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 CDC42EP2O14613 210 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 NDUFB6O95139 128 aa6.9□□□□□ -1.31
CPSF6-202ENST00000435070 EPPINO95925 133 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms