RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 LRRC17Q8N6Y2 441 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 SAMD12Q8N8I0 201 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 UBASH3BQ8TF42 649 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 UPRTQ96BW1 309 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 MMABQ96EY8 250 aaPredicted RBP17.03■□□□□ 0.32
CLK1-205ENST00000434813 DMRTB1Q96MA1 342 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 PRODH2Q9UF12 536 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 ZNF337Q9Y3M9 751 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 ADAM18Q9Y3Q7 739 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 TDRD6O60522 2096 aaKnown RBP17.03■□□□□ 0.32
CLK1-205ENST00000434813 TRAV1-2A0A0B4J238 106 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 OR2W5A6NFC9 320 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 LRRN3E7EW58 273 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 OR7A10O76100 309 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 ALAS2P22557 587 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 TP53I3Q53FA7 332 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 KLHL26Q53HC5 615 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 SLC35D3Q5M8T2 416 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 FAM160A2Q8N612 972 aaPredicted RBP17.03■□□□□ 0.32
CLK1-205ENST00000434813 OR14A16Q8NHC5 309 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 OIT3Q8WWZ8 545 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 TRIM63Q969Q1 353 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 PELI1Q96FA3 418 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 GPX7Q96SL4 187 aaPredicted RBP17.03■□□□□ 0.32
CLK1-205ENST00000434813 FOXQ1Q9C009 403 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 LRRN3Q9H3W5 708 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 TMEM165Q9HC07 324 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 NRIP3Q9NQ35 241 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 NLKQ9UBE8 527 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 WNT16Q9UBV4 365 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 NPFFR2Q9Y5X5 522 aa17.03■□□□□ 0.32
CLK1-205ENST00000434813 CD1AP06126 327 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 NME1P15531 152 aaKnown RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 RCVRNP35243 200 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 RPL4P36578 427 aaKnown RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 FNTBP49356 437 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 GDI2P50395 445 aaKnown RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 GBX2P52951 348 aaPredicted RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 MRPS15P82914 257 aaKnown RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 SERTAD2Q14140 314 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 GLCCI1Q86VQ1 547 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 OR13C5Q8NGS8 318 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 OR51Q1Q8NH59 317 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 TRMT10AQ8TBZ6 339 aaKnown RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 RNF170Q96K19 258 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 DDOQ99489 341 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 MARVELD1Q9BSK0 173 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 RANGRFQ9HD47 186 aaPredicted RBP17.02■□□□□ 0.32
CLK1-205ENST00000434813 KLHL1Q9NR64 748 aa17.02■□□□□ 0.32
CLK1-205ENST00000434813 IGHV1OR15-9A0A0B4J2B8 117 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 A0A1W2PRG6 482 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 H0YIG0 161 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 SLC43A1O75387 559 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 IGF2P01344 180 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 IFNA16P05015 189 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 RAB3BP20337 219 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 NAA10P41227 235 aaPredicted RBP17.01■□□□□ 0.31
CLK1-205ENST00000434813 PITPNBP48739 271 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 DIO1P49895 249 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 STARD6P59095 220 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 PON3Q15166 354 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 FNDC7Q5VTL7 733 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 ZNF57Q68EA5 555 aaPredicted RBP17.01■□□□□ 0.31
CLK1-205ENST00000434813 SIX5Q8N196 739 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 METTL27Q8N6F8 245 aaPredicted RBP17.01■□□□□ 0.31
CLK1-205ENST00000434813 ZSCAN1Q8NBB4 408 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 NPEPL1Q8NDH3 523 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 TTTY10Q9BZA0 68 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 NMNAT2Q9BZQ4 307 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 TMEM184BQ9Y519 407 aaPredicted RBP17.01■□□□□ 0.31
CLK1-205ENST00000434813 ALG5Q9Y673 324 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 IGKV1D-42A0A075B6H8 117 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 HCCSP53701 268 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 PRPS1P60891 318 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 SLC25A35Q3KQZ1 300 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 TCTE1Q5JU00 501 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 GKN2Q86XP6 184 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 OR7G1Q8NGA0 311 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 OR51L1Q8NGJ5 315 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 RFT1Q96AA3 541 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 FYTTD1Q96QD9 318 aaKnown RBP17.01■□□□□ 0.31
CLK1-205ENST00000434813 NMNAT3Q96T66 252 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 SLC38A3Q99624 504 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 WACQ9BTA9 647 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 MFRPQ9BY79 579 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 HDHD2Q9H0R4 259 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 PRDM6Q9NQX0 595 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 CLCA3PQ9Y6N3 262 aa17.01■□□□□ 0.31
CLK1-205ENST00000434813 TLCD2A6NGC4 264 aa17■□□□□ 0.31
CLK1-205ENST00000434813 HYAL3O43820 417 aaPredicted RBP17■□□□□ 0.31
CLK1-205ENST00000434813 ORC5O43913 435 aa17■□□□□ 0.31
CLK1-205ENST00000434813 ARL6IP5O75915 188 aa17■□□□□ 0.31
CLK1-205ENST00000434813 WNT1P04628 370 aa17■□□□□ 0.31
CLK1-205ENST00000434813 SPI1P17947 270 aa17■□□□□ 0.31
CLK1-205ENST00000434813 ADH7P40394 386 aa17■□□□□ 0.31
CLK1-205ENST00000434813 BIKQ13323 160 aa17■□□□□ 0.31
CLK1-205ENST00000434813 IL10RAQ13651 578 aa17■□□□□ 0.31
CLK1-205ENST00000434813 RPL22L1Q6P5R6 122 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms