RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PRRG4Q9BZD6 226 aa13.78□□□□□ -0.2
CNOT9-205ENST00000433439 REEP1Q9H902 201 aa13.78□□□□□ -0.2
CNOT9-205ENST00000433439 C6orf203Q9P0P8 240 aaPredicted RBP13.78□□□□□ -0.2
CNOT9-205ENST00000433439 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
CNOT9-205ENST00000433439 MED31Q9Y3C7 131 aa13.78□□□□□ -0.2
CNOT9-205ENST00000433439 SAMHD1Q9Y3Z3 626 aaKnown RBP13.78□□□□□ -0.2
CNOT9-205ENST00000433439 TRAV36DV7A0A075B6V5 113 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 CLCA1A8K7I4 914 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 LRRN3E7EW58 273 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 E2F6O75461 281 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 MPDZO75970 2070 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 SYNGR4O95473 234 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 CH25HO95992 272 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 IFI30P13284 250 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 HOXB6P17509 224 aaKnown RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 FPR1P21462 350 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 FKBP2P26885 142 aaKnown RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 GTF2E2P29084 291 aaKnown RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 CLK1P49759 484 aaKnown RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 LSM11P83369 360 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 LAPTM4AQ15012 233 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 EXOC3L2Q2M3D2 409 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 EIF2S3LQ2VIR3 472 aaKnown RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 RPTNQ6XPR3 784 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 TMPPEQ6ZT21 453 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 P4HA3Q7Z4N8 544 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 DOLPP1Q86YN1 238 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 NRMQ8IXM6 262 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 C10orf67Q8IYJ2 551 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 GALNT11Q8NCW6 608 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 PAPD5Q8NDF8 572 aaKnown RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 PRR7Q8TB68 274 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 ACOT11Q8WXI4 607 aaPredicted RBP13.77□□□□□ -0.21
CNOT9-205ENST00000433439 ROBO4Q8WZ75 1007 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 TAAR8Q969N4 342 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 ALPK1Q96QP1 1244 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 TMEM43Q9BTV4 400 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 SRXN1Q9BYN0 137 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 POTEKPQ9BYX7 375 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 TIGARQ9NQ88 270 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 VNN3Q9NY84 501 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 HDGFL3Q9Y3E1 203 aa13.77□□□□□ -0.21
CNOT9-205ENST00000433439 A0A087WUU8 490 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 A0A1W2PRQ8 180 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 ENO4A6NNW6 628 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 AHRRA9YTQ3 701 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 KDM4EB2RXH2 506 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 HNRNPRO43390 633 aaKnown RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 WDR1O75083 606 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 GABRA1P14867 456 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 ACVR2AP27037 513 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 RBM34P42696 430 aaKnown RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 IST1P53990 364 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 DGCR6Q14129 220 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 PON3Q15166 354 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 SEC23BQ15437 767 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 C5orf46Q6UWT4 87 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 AMIGO2Q86SJ2 522 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 SLC7A13Q8TCU3 470 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 LRTOMTQ8WZ04 291 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 DUS3LQ96G46 650 aaKnown RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 ADGRG7Q96K78 797 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 KLHL4Q9C0H6 718 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 TP63Q9H3D4 680 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 ANKRD19PQ9H560 264 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-205ENST00000433439 C20orf141Q9NUB4 165 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 ARMC1Q9NVT9 282 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 DNAJB9Q9UBS3 223 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 LYVE1Q9Y5Y7 322 aa13.76□□□□□ -0.21
CNOT9-205ENST00000433439 LIPT2A6NK58 231 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 H0YHG0 523 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 CLOCKO15516 846 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 OR2T1O43869 369 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 OR10H3O60404 316 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 NPIPB7O75200 414 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 DEAF1O75398 565 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-205ENST00000433439 KRT36O76013 467 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 AKR7A3O95154 331 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 PMS2P2O95744 297 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 LDLRP01130 860 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 KLK2P20151 261 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 FASP25445 335 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 SLC35A1P78382 337 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 SF3B4Q15427 424 aaKnown RBP eCLIP13.75□□□□□ -0.21
CNOT9-205ENST00000433439 ACSF3Q4G176 576 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-205ENST00000433439 FAM69AQ5T7M9 428 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 ZFP1Q6P2D0 407 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 Q6ZPB1 254 aaPredicted RBP13.75□□□□□ -0.21
CNOT9-205ENST00000433439 MBOAT2Q6ZWT7 520 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 RPRMLQ8N4K4 120 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 OR4K5Q8NGD3 323 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 FNDC9Q8TBE3 224 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 ZPLD1Q8TCW7 415 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 ZHX1-C8orf76Q96EF9 292 aa13.75□□□□□ -0.21
CNOT9-205ENST00000433439 SGTBQ96EQ0 304 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms