RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SEC22AQ96IW7 307 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CRB3Q9BUF7 120 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 BIN3Q9NQY0 253 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CTSFQ9UBX1 484 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 NDRG3Q9UGV2 375 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 WDR45Q9Y484 360 aa10.66□□□□□ -0.7
HMGCS1-202ENST00000433297 CASP8AP2Q9UKL3 1982 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF879B4DU55 563 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 SYT5O00445 386 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 MAN2B1O00754 1011 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 PCDH8O95206 1070 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF3P17036 446 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 CALCRP30988 508 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 RIPPLY1Q0D2K3 151 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 CDK5R1Q15078 307 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 OR51S1Q8NGJ8 323 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 OR6K6Q8NGW6 343 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 TMEM239Q8WW34 195 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 SMIM19Q96E16 107 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 PDCD10Q9BUL8 212 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC25A32Q9H2D1 315 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 XKR8Q9H6D3 395 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 MRPL17Q9NRX2 175 aaKnown RBP10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 XIRP2A4UGR9 3374 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 A0A087WV48 116 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 A0A1B0GVT2 93 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 KANTRA0A1W2PQU2 76 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 A0A1W2PR48 441 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 MPTX1A8MV57 137 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 KLF4O43474 513 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 SGCEO43556 437 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 CD53P19397 219 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 CNR1P21554 472 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 POLR2GP62487 172 aaKnown RBP eCLIP10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 ZCCHC12Q6PEW1 402 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 LCTLQ6UWM7 567 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 LDLRAD3Q86YD5 345 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 THAP6Q8TBB0 222 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 BPIFA2Q96DR5 249 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 JAM3Q9BX67 310 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 CMC2Q9NRP2 79 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 CLDND1Q9NY35 253 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 FOXJ3Q9UPW0 622 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 PLEKHM1Q9Y4G2 1056 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 V9GY05 133 aa10.65□□□□□ -0.7
HMGCS1-202ENST00000433297 ACOT7O00154 380 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 NARSO43776 548 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 RCBTB2O95199 551 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PAK4O96013 591 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 MAS1P04201 325 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 SPP1P10451 314 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 LIPCP11150 499 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 GTF2F2P13984 249 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 METAP1P53582 386 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PRMT2P55345 433 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TAS2R20P59543 309 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 BLOC1S1P78537 153 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 GUCA2AQ02747 115 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 CCDC157Q569K6 752 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 RAB12Q6IQ22 244 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 USP50Q70EL3 339 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OVCH1Q7RTY7 1134 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 BEST3Q8N1M1 668 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 EIF4E3Q8N5X7 224 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PCSK9Q8NBP7 692 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 VN1R2Q8NFZ6 395 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR4C16Q8NGL9 310 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR6K3Q8NGY3 331 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC35A4Q96G79 324 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TSPAN10Q9H1Z9 355 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM231Q9H6L2 316 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 INPP5EQ9NRR6 644 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 COA4Q9NYJ1 87 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR5V1Q9UGF6 321 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 KLF2Q9Y5W3 355 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 SPTBP11277 2137 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 A0A1W2PRU2 124 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR6C68A6NDL8 312 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 FAM25EA8MYX2 175 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PIN1P1O15428 100 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 IL5P05113 134 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 CSNK2A2P19784 350 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 MPIP34949 423 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 RBMS2Q15434 407 aaKnown RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 NDUFAF7Q7L592 441 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 LNX2Q8N448 690 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 C12orf45Q8N5I9 185 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 OR56A1Q8NGH5 318 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TNFRSF13CQ96RJ3 184 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 NKX3-1Q99801 234 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 WDR13Q9H1Z4 485 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TCF7L1Q9HCS4 588 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 ZNF443Q9Y2A4 671 aaPredicted RBP10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 SLC35A3Q9Y2D2 325 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 TMEM200CA6NKL6 621 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 EMC8O43402 210 aa10.64□□□□□ -0.71
HMGCS1-202ENST00000433297 PRICKLE3O43900 615 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms