RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 APOOLQ6UXV4 268 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 SORCS1Q8WY21 1168 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 SLC39A7Q92504 469 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 SLC22A18Q96BI1 424 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 HMSDA8MTL9 139 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 K7ERQ8 282 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 UQCRC2P22695 453 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 AOAHP28039 575 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 FAM189A2Q15884 450 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 C1orf94Q6P1W5 598 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 SLC35F3Q8IY50 421 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 PBX4Q9BYU1 374 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 EXO5Q9H790 373 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 PRSS47A8MTI9 375 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 CALCRP30988 508 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 CARD18P57730 90 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 MPPED2Q15777 294 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 BATFQ16520 125 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 LRRC73Q5JTD7 316 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 MSRB3Q8IXL7 192 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 ZNF283Q8N7M2 679 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 CCDC74BQ96LY2 380 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 PKP4Q99569 1192 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 KCNJ15Q99712 375 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 WRAP53Q9BUR4 548 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 TRPV4Q9HBA0 871 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 IL21Q9HBE4 155 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
SYNGAP1-203ENST00000428982 TRBV5-4A0A0C4DH59 114 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 CBY3A6NI87 242 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 UBL3O95164 117 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 DRD2P14416 443 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 PBX2P40425 430 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 FABP5Q01469 135 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 TMEM31Q5JXX7 168 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 LILRA6Q6PI73 481 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 COMTD1Q86VU5 262 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 NPRL2Q8WTW4 380 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 CAMK1GQ96NX5 476 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 AIF1LQ9BQI0 150 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 SULT4A1Q9BR01 284 aa13.4□□□□□ -0.27
SYNGAP1-203ENST00000428982 SERTM1A2A2V5 107 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 LANCL1O43813 399 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 GP1BAP07359 652 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 HCKP08631 526 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 MECP2P51608 486 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 HNRNPKP61978 463 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■■■□□ 18.3
SYNGAP1-203ENST00000428982 DGCR2P98153 550 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 SEMG2Q02383 582 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 TDGQ13569 410 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF660Q6AZW8 331 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZC3H14Q6PJT7 736 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 MISPQ8IVT2 679 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF511Q8NB15 262 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 KCTD12Q96CX2 325 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 RRNAD1Q96FB5 475 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF576Q9H609 170 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 UPK3BL1B0FP48 263 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 UPK3BL2E5RIL1 263 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 GMFGO60234 142 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 C6orf47O95873 294 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 UCHL1P09936 223 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 SLBPQ14493 270 aaKnown RBP eCLIP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 HABP2Q14520 560 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR2W3Q7Z3T1 314 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 OR14K1Q8NGZ2 314 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 CHTF18Q8WVB6 975 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 LRIG1Q96JA1 1093 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZNF514Q96K75 400 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 NEUROD4Q9HD90 331 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 TRBV23OR9-2A0A075B6M9 112 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 A0A087WZY1 265 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 TRBV5-3A0A0A0MS03 114 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 RPS13P62277 151 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 TGM3Q08188 693 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 LKAAEAR1Q8TD35 194 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 SMIM14Q96QK8 99 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 ZSCAN32Q9NX65 697 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 CD84Q9UIB8 345 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 CCL26Q9Y258 94 aa13.39□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3DA0A087WVF3 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3IA0A087WXS9 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3EA0A087X179 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3KA0A087X1G2 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3FA6NER0 549 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 NUDT19A8MXV4 375 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3LB9A6J9 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TGOLN2O43493 480 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3HP0C7X1 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TACR1P25103 407 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3GQ6DHY5 549 aa13.38□□□□□ -0.27
SYNGAP1-203ENST00000428982 TBC1D3CQ6IPX1 549 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms