RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 TXNL4AP83876 142 aaKnown RBP14.46□□□□□ -0.09
VARS-216ENST00000428445 CARTPTQ16568 116 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 NUDCD3Q8IVD9 361 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 TMEM99Q8N816 258 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 ZNF781Q8N8C0 355 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 ANKS4BQ8N8V4 417 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 ZIC4Q8N9L1 334 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 PMM1Q92871 262 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 ZBTB9Q96C00 473 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
VARS-216ENST00000428445 ZNF385AQ96PM9 386 aaKnown RBP14.46□□□□□ -0.09
VARS-216ENST00000428445 SORCS2Q96PQ0 1159 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 TMEM109Q9BVC6 243 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 PRR14Q9BWN1 585 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 AMBRA1Q9C0C7 1298 aa14.46□□□□□ -0.09
VARS-216ENST00000428445 HMGN4O00479 90 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 BIRC5O15392 142 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 TYROBPO43914 113 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 AKR7A3O95154 331 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 CHRM4P08173 479 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 MYZAPP0CAP1 466 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 CHI3L1P36222 383 aaPredicted RBP14.45□□□□□ -0.1
VARS-216ENST00000428445 HTR3AP46098 478 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 SLC35A1P78382 337 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 BNIP2Q12982 314 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 CEACAM7Q14002 265 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 SLC17A1Q14916 467 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 SWI5Q1ZZU3 235 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 DPY19L1Q2PZI1 675 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 SPANXN4Q5MJ08 99 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 RNF130Q86XS8 419 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 PROX1Q92786 737 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 TESCQ96BS2 214 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 TEX37Q96LM6 180 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 FOXN4Q96NZ1 517 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 SLC35A5Q9BS91 424 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 FKRPQ9H9S5 495 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 EXOSC3Q9NQT5 275 aaKnown RBP14.45□□□□□ -0.1
VARS-216ENST00000428445 MARCOQ9UEW3 520 aaPredicted RBP14.45□□□□□ -0.1
VARS-216ENST00000428445 TRAPPC4Q9Y296 219 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 PMF1-BGLAPU3KQ54 211 aa14.45□□□□□ -0.1
VARS-216ENST00000428445 NBEAL1Q6ZS30 2694 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 ANK2Q01484 3957 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 IGHV4-61A0A0C4DH41 118 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 VWC2LB2RUY7 222 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 CDKN2CP42773 168 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 POLR2HP52434 150 aaKnown RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 TUBA1BP68363 451 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 TUBA4AP68366 448 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 CHRNB3Q05901 458 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 CASP8Q14790 479 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 OR7A5Q15622 319 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 COX20Q5RI15 118 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 OTUD3Q5T2D3 398 aaPredicted RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 TUBA1AQ71U36 451 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 PNPT1Q8TCS8 783 aaKnown RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 MSI2Q96DH6 328 aaKnown RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 NEURL3Q96EH8 262 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 AURKBQ96GD4 344 aaPredicted RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 VRK1Q99986 396 aaPredicted RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 NAA11Q9BSU3 229 aaPredicted RBP14.44□□□□□ -0.1
VARS-216ENST00000428445 SOX7Q9BT81 388 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 C19orf24Q9BVV8 132 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 SLC38A1Q9H2H9 487 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 RLIMQ9NVW2 624 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 TMEM160Q9NX00 188 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 DCTN4Q9UJW0 460 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 SLC9A8Q9Y2E8 581 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 AMDHD2Q9Y303 409 aa14.44□□□□□ -0.1
VARS-216ENST00000428445 IGHV1-18A0A0C4DH31 117 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 LOC100289279A0A1B0GTE1 492 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 NR5A2O00482 541 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 EIF1BO60739 113 aaKnown RBP14.43□□□□□ -0.1
VARS-216ENST00000428445 SERPINE1P05121 402 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 GSNP06396 782 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 GKN3PP0CG01 181 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 MPGP29372 298 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 KHKP50053 298 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 PDLIM4P50479 330 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 PRPS1P60891 318 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 LRRC74AQ0VAA2 488 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 CHI3L2Q15782 390 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 FAM120AOSQ5T036 256 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 VHLLQ6RSH7 139 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 AAED1Q7RTV5 226 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 GPAT4Q86UL3 456 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 CMIPQ8IY22 773 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 DDIT4LQ96D03 193 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 SEC61A2Q9H9S3 476 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 SSU72Q9NP77 194 aaKnown RBP14.43□□□□□ -0.1
VARS-216ENST00000428445 PARPBPQ9NWS1 579 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 RAP2CQ9Y3L5 183 aa14.43□□□□□ -0.1
VARS-216ENST00000428445 LGI1O95970 557 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 SRD5A1P18405 259 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 IL12AP29459 219 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 NR4A2P43354 598 aa14.42□□□□□ -0.1
VARS-216ENST00000428445 RPL14P50914 215 aaKnown RBP14.42□□□□□ -0.1
VARS-216ENST00000428445 ANXA11P50995 505 aaKnown RBP14.42□□□□□ -0.1
VARS-216ENST00000428445 CLNS1AP54105 237 aaKnown RBP14.42□□□□□ -0.1
VARS-216ENST00000428445 ABCE1P61221 599 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms