RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 M0R1B8 84 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 MAP2K6P52564 334 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 NUDT6P53370 316 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 MVDP53602 400 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 BST1Q10588 318 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 C9orf135Q5VTT2 229 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 ZNF544Q6NX49 715 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 PAQR6Q6TCH4 344 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 FBXL14Q8N1E6 418 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 TRIML2Q8N7C3 387 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 ZIC4Q8N9L1 334 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 WDR60Q8WVS4 1066 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 HTRA1Q92743 480 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 TMEM45BQ96B21 275 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 OR52E6Q96RD3 313 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 NAA11Q9BSU3 229 aaPredicted RBP11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 SLC17A5Q9NRA2 495 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 SLC6A13Q9NSD5 602 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 RLIMQ9NVW2 624 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 PARPBPQ9NWS1 579 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 POU2F3Q9UKI9 436 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 GPR45Q9Y5Y3 372 aa11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 V9GYY5 206 aaPredicted RBP11.44□□□□□ -0.58
DEPDC7-203ENST00000427755 ABCA1O95477 2261 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 FBN3Q75N90 2809 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 DSPPQ9NZW4 1301 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 FAM234BA2RU67 622 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 LIPT2A6NK58 231 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ELOA3DA6NLF2 546 aaPredicted RBP11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 H7C417 338 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 GSNP06396 782 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 IL7RP16871 459 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 MPGP29372 298 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ACAA2P42765 397 aaKnown RBP11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 FABP6P51161 128 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 P2RY4P51582 365 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ELOA3BQ3SY89 546 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 HMBOX1Q6NT76 420 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 CLEC2AQ6UVW9 174 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ZNF621Q6ZSS3 439 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 SPATA19Q7Z5L4 167 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ZNF525Q8N782 197 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ELOA3Q8NG57 546 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 PNPT1Q8TCS8 783 aaKnown RBP11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 BOD1Q96IK1 185 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 ZNF385AQ96PM9 386 aaKnown RBP11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 UPB1Q9UBR1 384 aa11.43□□□□□ -0.58
DEPDC7-203ENST00000427755 COL6A5A8TX70 2615 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 CDHR4A6H8M9 788 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 AQP7P3A6NL99 342 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 A8MV72 311 aaPredicted RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 AKR7A3O95154 331 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 GKN3PP0CG01 181 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 NR2F1P10589 423 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 EPHA3P29320 983 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 DSCR9P59020 149 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 LOXL1Q08397 574 aaPredicted RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 LRRC74AQ0VAA2 488 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 CEACAM7Q14002 265 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 GNA13Q14344 377 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 RAB35Q15286 201 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 GSTA3Q16772 222 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 MST1LQ2TV78 715 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 TMEM249Q2WGJ8 235 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 OTUD3Q5T2D3 398 aaPredicted RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 C6orf52Q5T4I8 152 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 C1QTNF12Q5T7M4 302 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 VRK2Q86Y07 508 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 ZNF440Q8IYI8 595 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 DEPDC4Q8N2C3 294 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 TMEM99Q8N816 258 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 OR9K2Q8NGE7 335 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 ZBTB9Q96C00 473 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 TNFRSF13CQ96RJ3 184 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 SF3B5Q9BWJ5 86 aaKnown RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 PARD6BQ9BYG5 372 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 WDR55Q9H6Y2 383 aaPredicted RBP11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 AMDHD2Q9Y303 409 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 CHST2Q9Y4C5 530 aa11.42□□□□□ -0.58
DEPDC7-203ENST00000427755 CUBNO60494 3623 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 RFXANKO14593 260 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 HDAC3O15379 428 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 SNNO75324 88 aaPredicted RBP11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 KRT75O95678 551 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 GPIP06744 558 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 WDR4P57081 412 aaKnown RBP11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 VLDLRP98155 873 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 TGFBR3Q03167 851 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 BNIP2Q12982 314 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 OR7A5Q15622 319 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 LIN52Q52LA3 116 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 CEP85LQ5SZL2 805 aa11.41□□□□□ -0.58
DEPDC7-203ENST00000427755 PODNL1Q6PEZ8 512 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms