RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 FOLH1Q04609 750 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 FOXM1Q08050 763 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 FUT7Q11130 342 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 STX5Q13190 355 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 BIKQ13323 160 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CYLC2Q14093 348 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 MAPRE2Q15555 327 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 MAPK11Q15759 364 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ZSCAN26Q16670 478 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 PRICKLE4Q2TBC4 344 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 TRMT5Q32P41 509 aaKnown RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 RUNDC3AQ59EK9 446 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 VWA2Q5GFL6 755 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 DCAF12Q5T6F0 453 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CPTPQ5TA50 214 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ANXA8L1Q5VT79 327 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM268Q5VZI3 342 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 REP15Q6BDI9 236 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ANKRD26P1Q6NSI1 321 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 DGAT2L6Q6ZPD8 337 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 NET1Q7Z628 596 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 PATL1Q86TB9 770 aaKnown RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 VASH2Q86V25 355 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CALHM3Q86XJ0 350 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ST13P4Q8IZP2 240 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CLECL1Q8IZS7 167 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 C10orf111Q8N326 155 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 OR2L13Q8N349 312 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 NFAM1Q8NET5 270 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 OR8J3Q8NGG0 315 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 C9orf43Q8TAL5 461 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 STT3BQ8TCJ2 826 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 MIPOL1Q8TD10 442 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 C2CD4CQ8TF44 421 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 PTPMT1Q8WUK0 201 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 OR5P2Q8WZ92 322 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CIDECQ96AQ7 238 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ROPN1LQ96C74 230 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 PPCDCQ96CD2 204 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 LRRC58Q96CX6 371 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 RCN3Q96D15 328 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 MMABQ96EY8 250 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM41AQ96HV5 264 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 SGCZQ96LD1 299 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ANKRD27Q96NW4 1050 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 NODALQ96S42 347 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 INPP5KQ9BT40 448 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 FAIM2Q9BWQ8 316 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 VN1R1Q9GZP7 353 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 GLIPR2Q9H4G4 154 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 KAT8Q9H7Z6 458 aaKnown RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CXorf21Q9HAI6 301 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF71Q9NQZ8 489 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 C14orf105Q9NVL8 296 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 VAPAQ9P0L0 249 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 HCN3Q9P1Z3 774 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 C5AR2Q9P296 337 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM181Q9P2C4 612 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CTSFQ9UBX1 484 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 CD300AQ9UGN4 299 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 LEF1Q9UJU2 399 aaPredicted RBP4.96□□□□□ -1.62
C9orf3-205ENST00000427193 NDUFAF1Q9Y375 327 aa4.96□□□□□ -1.62
C9orf3-205ENST00000427193 ATRQ13535 2644 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 MAP1AP78559 2803 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 A0A0A0MQY5 61 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ARHGAP10A1A4S6 786 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 SYNDIG1LA6NDD5 238 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 GLOD5A6NK44 160 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 C21orf140B9A014 251 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 UPK1AO00322 258 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NR5A2O00482 541 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ATP5HO75947 161 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 STK17BO94768 372 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 CGAP01215 116 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 SP1P08047 785 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 COX7A2P14406 83 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 CSNK2A2P19784 350 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 CPN2P22792 545 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 F8A1P23610 371 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 PTPN4P29074 926 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 PPP2R1BP30154 601 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 TLX1P31314 330 aaPredicted RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 S100A3P33764 101 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 CDK9P50750 372 aaKnown RBP4.95□□□□□ -1.62
C9orf3-205ENST00000427193 XKP51811 444 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 MNAT1P51948 309 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 KCNK10P57789 538 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 BTG2P78543 158 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 SNTA1Q13424 505 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NCF4Q15080 339 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 RPS6KA2Q15349 733 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 MRGPRG-AS1Q2M3A8 158 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 PIGGQ5H8A4 983 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 SAXO2Q658L1 398 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 NANOGP8Q6NSW7 305 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 TMEM126BQ8IUX1 230 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 PGAM4Q8N0Y7 254 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 ZNF615Q8N8J6 731 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 OR4K14Q8NGD5 310 aa4.95□□□□□ -1.62
C9orf3-205ENST00000427193 OR2Y1Q8NGV0 311 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 314.9 ms