RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CAPN7Q9Y6W3 813 aa12.09□□□□□ -0.47
SNX3-204ENST00000426155 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 M0R3H8 397 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 TPST2O60704 377 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 MFN2O95140 757 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 AKR7A3O95154 331 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 IGHV3-9P01782 118 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 ADSLP30566 484 aaPredicted RBP12.08□□□□□ -0.48
SNX3-204ENST00000426155 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
SNX3-204ENST00000426155 NTF4P34130 210 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 IDUAP35475 653 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
SNX3-204ENST00000426155 CRYBA2P53672 197 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 CEACAM7Q14002 265 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 ZSWIM7Q19AV6 140 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 STK32CQ86UX6 486 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 ARMC8Q8IUR7 673 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 LURAP1LQ8IV03 231 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 P3H2Q8IVL5 708 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 GPR32P1Q8NGA4 272 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 LRRC58Q96CX6 371 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 RCN3Q96D15 328 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 ZHX1-C8orf76Q96EF9 292 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 ZNF607Q96SK3 696 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 SPATA5L1Q9BVQ7 753 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 ACTR6Q9GZN1 396 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 GP6Q9HCN6 339 aa12.08□□□□□ -0.48
SNX3-204ENST00000426155 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
SNX3-204ENST00000426155 RAI1Q7Z5J4 1906 aaPredicted RBP12.07□□□□□ -0.48
SNX3-204ENST00000426155 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 LIPT2A6NK58 231 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 ZNF724A8MTY0 619 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 BBIP1A8MTZ0 92 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 CASKO14936 926 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 NPIPB7O75200 414 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 ADAP00813 363 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 PCGF2P35227 344 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 OR3A2P47893 321 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 PCYT1AP49585 367 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 RGS8P57771 180 aaPredicted RBP12.07□□□□□ -0.48
SNX3-204ENST00000426155 SLC35A1P78382 337 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 H3F3AP84243 136 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 EGR4Q05215 589 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 RBBP4Q09028 425 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 MAPRE2Q15555 327 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 DUSP7Q16829 419 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 VMACQ2NL98 169 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 COQ5Q5HYK3 327 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 C1orf140Q5VVS0 124 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 ALKBH2Q6NS38 261 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 TREML1Q86YW5 311 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 TMEM99Q8N816 258 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 S100PBPQ96BU1 408 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 TAMM41Q96BW9 452 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 PIK3IP1Q96FE7 263 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 ELAC2Q9BQ52 826 aaKnown RBP12.07□□□□□ -0.48
SNX3-204ENST00000426155 ADPRHL2Q9NX46 363 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 SEC14L4Q9UDX3 406 aa12.07□□□□□ -0.48
SNX3-204ENST00000426155 RRP15Q9Y3B9 282 aaKnown RBP12.07□□□□□ -0.48
SNX3-204ENST00000426155 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 PRORSD1PA6NEY8 169 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 ELOA3DA6NLF2 546 aaPredicted RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 A8MVM7 634 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 M0QX08 132 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 DNPH1O43598 174 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 SERPINB7O75635 380 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 LYZL6O75951 148 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 CD247P20963 164 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 CRYGSP22914 178 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 FKBP2P26885 142 aaKnown RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 CYLC2Q14093 348 aaPredicted RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 NPTX1Q15818 432 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 ELOA3BQ3SY89 546 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 OTUD3Q5T2D3 398 aaPredicted RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 SPATA21Q7Z572 469 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 GALNT5Q7Z7M9 940 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 CALHM3Q86XJ0 350 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 RBM45Q8IUH3 476 aaKnown RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 ELOA3Q8NG57 546 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 OR8J3Q8NGG0 315 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 OR52E4Q8NGH9 312 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 OR4D11Q8NGI4 311 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 VANGL1Q8TAA9 524 aaPredicted RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 SLC35B4Q969S0 331 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 KTI12Q96EK9 354 aaPredicted RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 ARHGDIGQ99819 225 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 TACO1Q9BSH4 297 aaKnown RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 PTDSS2Q9BVG9 487 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 POTEKPQ9BYX7 375 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 PLEKHF2Q9H8W4 249 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 RPS6KB2Q9UBS0 482 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 TESQ9UGI8 421 aaKnown RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 TRAPPC4Q9Y296 219 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 PLEKHA6Q9Y2H5 1048 aa12.06□□□□□ -0.48
SNX3-204ENST00000426155 NOSIPQ9Y314 301 aaKnown RBP12.06□□□□□ -0.48
SNX3-204ENST00000426155 CCT8L1PA6NM43 557 aa12.05□□□□□ -0.48
SNX3-204ENST00000426155 GPIP06744 558 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms