RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 OR5M9Q8NGP3 310 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 SLC35B4Q969S0 331 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
PRPF39-202ENST00000424478 SDCCAG3Q96C92 435 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 PTDSS2Q9BVG9 487 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 RIBC2Q9H4K1 309 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
PRPF39-202ENST00000424478 A0A0J9YW62 118 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 CASQ2O14958 399 aaPredicted RBP12.1□□□□□ -0.47
PRPF39-202ENST00000424478 DPM1O60762 260 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 ALPLP05186 524 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 C1orf140Q5VVS0 124 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 KIF18BQ86Y91 864 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 GHDCQ8N2G8 530 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 FAM109AQ8N4B1 249 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 PIGXQ8TBF5 258 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 OSBPL10Q9BXB5 764 aa12.1□□□□□ -0.47
PRPF39-202ENST00000424478 NPIPA2E9PIF3 369 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 NPIPA3F8WFD2 350 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 BLOC1S5-TXNDC5H3BN57 136 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 PNMTP11086 282 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 BMP7P18075 431 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 IGFBP5P24593 272 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 GFRA1P56159 465 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 DAG1Q14118 895 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 CCDC103Q8IW40 242 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 TNFRSF13CQ96RJ3 184 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 KLHL4Q9C0H6 718 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 KRT84Q9NSB2 600 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 C11orf98E9PRG8 122 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 ACOT7O00154 380 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 AKR7A3O95154 331 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 PLGP00747 810 aaPredicted RBP12.09□□□□□ -0.47
PRPF39-202ENST00000424478 POU3F2P20265 443 aaPredicted RBP12.09□□□□□ -0.47
PRPF39-202ENST00000424478 APOBEC1P41238 236 aaKnown RBP12.09□□□□□ -0.47
PRPF39-202ENST00000424478 TMEM44Q2T9K0 475 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 SLC36A3Q495N2 470 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 C6orf52Q5T4I8 152 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 SLC46A3Q7Z3Q1 461 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 UCN2Q96RP3 112 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 PIGQQ9BRB3 760 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 C9orf16Q9BUW7 83 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 ASF1BQ9NVP2 202 aa12.09□□□□□ -0.47
PRPF39-202ENST00000424478 A0A1B0GTH9 108 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 HPNP05981 417 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 EIF1AXP47813 144 aaKnown RBP12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SLC9A3P48764 834 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SMIM11AP58511 58 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 C3orf33Q6P1S2 294 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 FAM98AQ8NCA5 519 aaKnown RBP12.08□□□□□ -0.48
PRPF39-202ENST00000424478 MOSPD2Q8NHP6 518 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 POP5Q969H6 163 aaKnown RBP12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SNRNP40Q96DI7 357 aaKnown RBP12.08□□□□□ -0.48
PRPF39-202ENST00000424478 MPP4Q96JB8 637 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 OR2B2Q9GZK3 357 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SLC25A18Q9H1K4 315 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 KLHL13Q9P2N7 655 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 TRGV5A0A0B4J1U4 118 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 A8MVM7 634 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 H3BN98 237 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 F13BP05160 661 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 NFATC3Q12968 1075 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 GGNQ86UU5 652 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SVOPLQ8N434 492 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 OR8D4Q8NGM9 314 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 UBE2FQ969M7 185 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SRXN1Q9BYN0 137 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 TOR3AQ9H497 397 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 EFCAB9A8MZ26 197 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 M0R082 166 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 NPIPB7O75200 414 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 ENPP1P22413 925 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF74Q16587 644 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SLC25A53Q5H9E4 307 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 FAHD1Q6P587 224 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF417Q8TAU3 575 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 SGTBQ96EQ0 304 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 ZNF587Q96SQ5 575 aaPredicted RBP12.08□□□□□ -0.48
PRPF39-202ENST00000424478 POLR2J3Q9H1A7 115 aaKnown RBP12.08□□□□□ -0.48
PRPF39-202ENST00000424478 ZDHHC11Q9H8X9 412 aa12.08□□□□□ -0.48
PRPF39-202ENST00000424478 CXCL13O43927 109 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 TP53P04637 393 aaPredicted RBP12.07□□□□□ -0.48
PRPF39-202ENST00000424478 GNAO1P09471 354 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 THRBP10828 461 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 HLA-DOBP13765 273 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 AHCYP23526 432 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 GRPRP30550 384 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 AQP2P41181 271 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 DIO1P49895 249 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 ALDH3A2P51648 485 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 OR2B6P58173 313 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 PRKCDQ05655 676 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 GK3PQ14409 553 aa12.07□□□□□ -0.48
PRPF39-202ENST00000424478 SWT1Q5T5J6 900 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms