RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 GLRX2Q9NS18 164 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 SLC7A7Q9UM01 511 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 FAM90A27PA6NNH2 459 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 EIF1BO60739 113 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 PRKD3O94806 890 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 AGFG1P52594 562 aaKnown RBP22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 CTBP2P56545 445 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 SLC7A6OSQ96CW6 309 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 SLC41A3Q96GZ6 507 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 GMPPAQ96IJ6 420 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 EPYCQ99645 322 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 NAA11Q9BSU3 229 aaPredicted RBP22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 KCNJ16Q9NPI9 418 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 ACTR3BQ9P1U1 418 aa22.72■■□□□ 1.23
TSPAN3-203ENST00000424443 A1L4Q6 167 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 IL18BPO95998 194 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 IMPDH2P12268 514 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 FPR1P21462 350 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 GTF2E2P29084 291 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 FOXF2Q12947 444 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 TRIM25Q14258 630 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 OR7A5Q15622 319 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 SLC25A35Q3KQZ1 300 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 RNF128Q8TEB7 428 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 CCDC124Q96CT7 223 aaKnown RBP22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 MPP4Q96JB8 637 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 AMBRA1Q9C0C7 1298 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 EMC9Q9Y3B6 208 aa22.71■■□□□ 1.23
TSPAN3-203ENST00000424443 OR5F1O95221 314 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 RPS5P46782 204 aaKnown RBP22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 SIRPAP78324 504 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 PIN1Q13526 163 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 TTC33Q6PID6 262 aaPredicted RBP22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 CYP2R1Q6VVX0 501 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 DHFR2Q86XF0 187 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 MED12LQ86YW9 2145 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 LIX1LQ8IVB5 337 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 CLPTM1LQ96KA5 538 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 KLHL9Q9P2J3 617 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 RIMS3Q9UJD0 308 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 CLEC4AQ9UMR7 237 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 V9GYQ6 96 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 DOPEY1Q5JWR5 2465 aa22.7■■□□□ 1.22
TSPAN3-203ENST00000424443 A0A1W2PNV4 684 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 SMAD9O15198 467 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 OR2T1O43869 369 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 NPIPB7O75200 414 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 DNAJC8O75937 253 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 GDF7Q7Z4P5 450 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 CYP4Z1Q86W10 505 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 LSRQ86X29 649 aaPredicted RBP22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 ABHD3Q8WU67 409 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 MCUR1Q96AQ8 359 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 SLC25A36Q96CQ1 311 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 PYURFQ96I23 114 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 PRRC1Q96M27 445 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 UCK2Q9BZX2 261 aa22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 FAM32AQ9Y421 112 aaKnown RBP22.69■■□□□ 1.22
TSPAN3-203ENST00000424443 TRAV36DV7A0A075B6V5 113 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 LIPT2A6NK58 231 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 YAP1P46937 504 aaKnown RBP22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 EGR4Q05215 589 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 RASGEF1BQ0VAM2 473 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 ST3GAL3Q11203 375 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 CDSNQ15517 529 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 MTX3Q5HYI7 312 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 FAM214BQ7L5A3 538 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 P3H2Q8IVL5 708 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 MFSD8Q8NHS3 518 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 PIGXQ8TBF5 258 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 ASB9Q96DX5 294 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 KTI12Q96EK9 354 aaPredicted RBP22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 LRRC46Q96FV0 321 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 LRGUKQ96M69 825 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 TMEM43Q9BTV4 400 aa22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 C6orf203Q9P0P8 240 aaPredicted RBP22.68■■□□□ 1.22
TSPAN3-203ENST00000424443 NKX2-6A6NCS4 301 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 EEF1E1-BLOC1S5C9J1V9 151 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 EEF1E1O43324 174 aaKnown RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 CYTIPO60759 359 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 SS18L1O75177 396 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 THRBP10828 461 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 PTNP21246 168 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 FOXD4Q12950 439 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 TMEM201Q5SNT2 666 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 FAM69AQ5T7M9 428 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 CCDC121Q6ZUS5 278 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 TSPYL5Q86VY4 417 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 FNDC11Q9BVV2 318 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 PIGMQ9H3S5 423 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 KLF2Q9Y5W3 355 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 IGKV1D-42A0A075B6H8 117 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 EBAG9O00559 213 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 SMNDC1O75940 238 aaKnown RBP eCLIP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 THY1P04216 161 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 OTUD3Q5T2D3 398 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 PAQR6Q6TCH4 344 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 MAMDC2Q7Z304 686 aaPredicted RBP22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 C10orf53Q8N6V4 93 aa22.67■■□□□ 1.22
TSPAN3-203ENST00000424443 PSMG3-AS1Q96PY0 264 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms