RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 MLC1Q15049 377 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 ZNF829Q3KNS6 432 aaPredicted RBP8.96□□□□□ -0.98
CMSS1-201ENST00000421999 GLT8D1Q68CQ7 371 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 PRICKLE2Q7Z3G6 844 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 LRRC18Q8N456 261 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 THRSPQ92748 146 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 ZNF566Q969W8 418 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 LOXL4Q96JB6 756 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 SEMA4CQ9C0C4 833 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 ST14Q9Y5Y6 855 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 ANAPC1Q9H1A4 1944 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 ANKRD36A6QL64 1941 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 TCF20Q9UGU0 1960 aaKnown RBP8.96□□□□□ -0.98
CMSS1-201ENST00000421999 EIF1BO60739 113 aaKnown RBP8.96□□□□□ -0.98
CMSS1-201ENST00000421999 SOX3P41225 446 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 PDE7AQ13946 482 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 EIF2B1Q14232 305 aaKnown RBP8.96□□□□□ -0.98
CMSS1-201ENST00000421999 GPR139Q6DWJ6 353 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 VASNQ6EMK4 673 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 UBE3DQ7Z6J8 389 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 CPT1CQ8TCG5 803 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 BORCS8Q96FH0 119 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 ZNF845Q96IR2 970 aaPredicted RBP8.96□□□□□ -0.98
CMSS1-201ENST00000421999 TNFRSF13CQ96RJ3 184 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 A4GALTQ9NPC4 353 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 FBXL4Q9UKA2 621 aa8.96□□□□□ -0.98
CMSS1-201ENST00000421999 TRAV17A0A0B4J275 112 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TEX13CA0A0J9YWL9 993 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DPPA5A6NC42 116 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 FIGNL2A6NMB9 653 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 A8MVM7 634 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 KCNK2O95069 426 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 IGLV3-19P01714 112 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 MT-ND2P03891 347 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 NID1P14543 1247 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 E2F2Q14209 437 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 FAM189A2Q15884 450 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 HSD17B12Q53GQ0 312 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 RNF165Q6ZSG1 346 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 OVCH1Q7RTY7 1134 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 GRINAQ7Z429 371 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 CEACAM19Q7Z692 300 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TSPYL5Q86VY4 417 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 RBM45Q8IUH3 476 aaKnown RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 BCORP1Q8N888 145 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 OR11G2Q8NGC1 345 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 SCARF2Q96GP6 870 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 MGLLQ99685 303 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 HCAR1Q9BXC0 346 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 KLHL13Q9P2N7 655 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 CORINQ9Y5Q5 1042 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 A0A1B0GW55 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 A0A1W2PNR3 127 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TNFRSF21O75509 655 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4L2P0CJ85 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4L3P0CJ86 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4L4P0CJ87 422 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4L5P0CJ88 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4L6P0CJ89 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4L7P0CJ90 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 PRKAR1BP31321 381 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ACTA2P62736 377 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ACTG2P63267 376 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TMEM53Q6P2H8 277 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TBPL2Q6SJ96 375 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 NDUFAF7Q7L592 441 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TMPRSS12Q86WS5 348 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 SNX29P2Q8IUI4 249 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 MSRB3Q8IXL7 192 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TMEM105Q8N8V8 129 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 HOXB13Q92826 284 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 CLCC1Q96S66 551 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 INTS14Q96SY0 518 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 DUX4Q9UBX2 424 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 PLEKHA6Q9Y2H5 1048 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TMEM184BQ9Y519 407 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 AKAP6Q13023 2319 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 TRBV4-1A0A0J9YWV2 114 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 A0A1W2PS29 197 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 J3QRK9 145 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 NOS1APO75052 506 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 MTRF1O75570 445 aaKnown RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 FTH1P19P0C7X4 201 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 POLR2IP36954 125 aaKnown RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 GIPRP48546 466 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 P2RX1P51575 399 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 BIDP55957 195 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 BLMHQ13867 455 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 MELKQ14680 651 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 NKG7Q16617 165 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ATAD3CQ5T2N8 411 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 BCL2L15Q5TBC7 163 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ZNF227Q86WZ6 799 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 PTOV1Q86YD1 416 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 GOT1L1Q8NHS2 421 aaPredicted RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 NEIL3Q8TAT5 605 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ZNF675Q8TD23 568 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 HDAC2Q92769 488 aaKnown RBP8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ERVK-18Q9QC07 812 aa8.95□□□□□ -0.98
CMSS1-201ENST00000421999 ING4Q9UNL4 249 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms