RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 EXOGQ9Y2C4 368 aaKnown RBP8.04□□□□□ -1.12
SNCA-206ENST00000420646 SLC35A3Q9Y2D2 325 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 CHD8Q9HCK8 2581 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 ELOA3DA6NLF2 546 aaPredicted RBP8.04□□□□□ -1.12
SNCA-206ENST00000420646 SLC30A4O14863 429 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 IGHA1P01876 353 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 TFP02787 698 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 UBL4AP11441 157 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 PPICP45877 212 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 RPS5P46782 204 aaKnown RBP8.04□□□□□ -1.12
SNCA-206ENST00000420646 BCAP31P51572 246 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 ZNF117Q03924 483 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 SKP2Q13309 424 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 EBPQ15125 230 aaKnown RBP8.04□□□□□ -1.12
SNCA-206ENST00000420646 ELOA3BQ3SY89 546 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 BICRALQ6AI39 1079 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 PWWP2BQ6NUJ5 590 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 ZNF550Q7Z398 422 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 CCDC190Q86UF4 302 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 MARCH9Q86YJ5 346 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 ELOA3Q8NG57 546 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 SLC25A46Q96AG3 418 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 SGTBQ96EQ0 304 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 LCORQ96JN0 433 aaPredicted RBP8.04□□□□□ -1.12
SNCA-206ENST00000420646 SLC41A2Q96JW4 573 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 KCTD7Q96MP8 289 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 NEURL2Q9BR09 285 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 SLC30A2Q9BRI3 323 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 MIXL1Q9H2W2 232 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 MKKSQ9NPJ1 570 aaPredicted RBP8.04□□□□□ -1.12
SNCA-206ENST00000420646 PRODH2Q9UF12 536 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 DCHS1Q96JQ0 3298 aa8.04□□□□□ -1.12
SNCA-206ENST00000420646 ADAMTS9Q9P2N4 1935 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 TCRBV16S1A1N1A0A5B0 115 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 GABRPO00591 440 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 POLR1CO15160 346 aaPredicted RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 ZNF264O43296 627 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 CDC40O60508 579 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNCA-206ENST00000420646 SELENOFO60613 162 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 DLGAP3O95886 979 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SBK2P0C263 348 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ZNF3P17036 446 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ABCD3P28288 659 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 TACR3P29371 465 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 PYCR1P32322 319 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 EPHA4P54764 986 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ZNF85Q03923 595 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ZNF79Q15937 498 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 RNLSQ5VYX0 342 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 IL20RBQ6UXL0 311 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ZNF511Q8NB15 262 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 STT3BQ8TCJ2 826 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SMPDL3BQ92485 455 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 MED17Q9NVC6 651 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 C14orf105Q9NVL8 296 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 CHRNA9Q9UGM1 479 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 PEX16Q9Y5Y5 336 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 EPG5Q9HCE0 2579 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 LY6G6EA0A0G2JKS1 128 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 A0A1B0GX78 115 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 DCTN6O00399 190 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 GABRA5P31644 462 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 DAB2P98082 770 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.03□□□□□ -1.12
SNCA-206ENST00000420646 FAM199XQ6PEV8 388 aaPredicted RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 QSOX2Q6ZRP7 698 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 COX15Q7KZN9 410 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 KDM8Q8N371 416 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ARIH2OSQ8N7S6 290 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 NEIL3Q8TAT5 605 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 RAB33BQ9H082 229 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 BABAM2Q9NXR7 383 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 U3KQA8 63 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 TEX13CA0A0J9YWL9 993 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 A0A1W2PRG6 482 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 B4DXG7 233 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 IL33O95760 270 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 PLGP00747 810 aaPredicted RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 HK1P19367 917 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SLC2A5P22732 501 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SHC1P29353 583 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 IL12BP29460 328 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 PSMB10P40306 273 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 CDKN2AP42771 156 aaKnown RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 OR10A3P58181 314 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 RUNX1T1Q06455 604 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 FNDC7Q5VTL7 733 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 DUSP19Q8WTR2 217 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 PPP1R14BQ96C90 147 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SLC25A36Q96CQ1 311 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SLC46A1Q96NT5 459 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 GAREM1Q9H706 876 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 RPRD1BQ9NQG5 326 aaKnown RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 ING1Q9UK53 422 aaPredicted RBP8.03□□□□□ -1.12
SNCA-206ENST00000420646 TMEM5Q9Y2B1 443 aa8.03□□□□□ -1.12
SNCA-206ENST00000420646 V9GYH0 126 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms