RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 TCEAL6Q6IPX3 200 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 CBLN3Q6UW01 205 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 RTL4Q6ZR62 310 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 CPEB2Q7Z5Q1 589 aaKnown RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 OAFQ86UD1 273 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 MARCH3Q86UD3 253 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 CPOQ8IVL8 374 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 AMER2Q8N7J2 671 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 GATSQ8NAP1 163 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 OR8K3Q8NH51 312 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 OR51A7Q8NH64 312 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 NUBPLQ8TB37 319 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 TBC1D15Q8TC07 691 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 FANK1Q8TC84 345 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 METTL21AQ8WXB1 218 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 RPL3LQ92901 407 aaKnown RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 TCEAL3Q969E4 200 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 RFKQ969G6 155 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 ZNF524Q96C55 264 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 SGTBQ96EQ0 304 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 RNFT2Q96EX2 444 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 LRFN5Q96NI6 719 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 MGLLQ99685 303 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 CTRCQ99895 268 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 WDR77Q9BQA1 342 aaPredicted RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 RTN4RQ9BZR6 473 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 SLC19A3Q9BZV2 496 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 AKIRIN1Q9H9L7 192 aaPredicted RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 C12orf10Q9HB07 376 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 MCCC2Q9HCC0 563 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 HINT3Q9NQE9 182 aaKnown RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 CMC2Q9NRP2 79 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 RXFP3Q9NSD7 469 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 H2AFY2Q9P0M6 372 aaPredicted RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 PCDHGA3Q9Y5H0 932 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 NPFFR2Q9Y5X5 522 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 CABIN1Q9Y6J0 2220 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 TRIOO75962 3097 aa6.97□□□□□ -1.29
SHPRH-204ENST00000417762 COL5A1P20908 1838 aaPredicted RBP6.97□□□□□ -1.29
SHPRH-204ENST00000417762 IGKV1D-42A0A075B6H8 117 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 TRAV27A0A087WT01 109 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 FAM86C2PA6NEL3 165 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 OR6C70A6NIJ9 312 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 TMEM200CA6NKL6 621 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 CCRL2O00421 344 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 ADAM10O14672 748 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 FLRT2O43155 660 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 AIREO43918 545 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 FOXD2O60548 495 aaPredicted RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 CSO75390 466 aaKnown RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 OR7A10O76100 309 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 SCG5P05408 212 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 HSMCR30P0CW71 290 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 PEPDP12955 493 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 CCL4P13236 92 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 ZNF28P17035 718 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 HK1P19367 917 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 GADD45AP24522 165 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 MST1P26927 711 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 HTR1FP30939 366 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 SLC6A6P31641 620 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 NTF4P34130 210 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 ETV5P41161 510 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 SLC1A3P43003 542 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 SLC6A8P48029 635 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 SLC9A3P48764 834 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 ETV1P50549 477 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 CDH11P55287 796 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 NRG3P56975 720 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 VBP1P61758 197 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 NCS1P62166 190 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 LSM3P62310 102 aaKnown RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 ZNF117Q03924 483 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 SPHARQ15513 63 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 MED22Q15528 200 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 MOGQ16653 247 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 PAPD4Q6PIY7 484 aaKnown RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 PAQR6Q6TCH4 344 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 CXXC5Q7LFL8 322 aaKnown RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 NUP54Q7Z3B4 507 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 BBS1Q8NFJ9 593 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 NDNFQ8TB73 568 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 DYNC2LI1Q8TCX1 351 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 LIPHQ8WWY8 451 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 PTP4A1Q93096 173 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 VMP1Q96GC9 406 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 LIN37Q96GY3 246 aaPredicted RBP6.96□□□□□ -1.3
SHPRH-204ENST00000417762 OPALINQ96PE5 141 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 LPAR4Q99677 370 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 KLHDC3Q9BQ90 382 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 MESP1Q9BRJ9 268 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 TMEM43Q9BTV4 400 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 CRB3Q9BUF7 120 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 IFT27Q9BW83 186 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 MND1Q9BWT6 205 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 TAPBPLQ9BX59 468 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 TBL1XR1Q9BZK7 514 aa6.96□□□□□ -1.3
SHPRH-204ENST00000417762 WDR54Q9H977 334 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms