RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ZFP57Q9NU63 452 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 GAGE2DQ9UEU5 116 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 EXOSC1Q9Y3B2 195 aaKnown RBP2.22□□□□□ -2.05
MCF2-204ENST00000414978 NME7Q9Y5B8 376 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 CITO14578 2027 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 MYO7AQ13402 2215 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 COL6A6A6NMZ7 2263 aa2.22□□□□□ -2.05
MCF2-204ENST00000414978 A0A0J9YYE9 177 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ATP6AP2A0A1C7CYW4 349 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 LOC390937A0A1W2PQ73 354 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 HSBP1L1C9JCN9 74 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SGK494L7N484 410 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TRAFD1O14545 582 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 YKT6O15498 198 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 B4GALT5O43286 388 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 LGI1O95970 557 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TRBC1P01850 177 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CD48P09326 243 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ANPEPP15144 967 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CD80P33681 288 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FOXG1P55316 489 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 DCDC1P59894 354 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ERVPABLB-1P60509 514 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 OTUD4Q01804 1114 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 LRRC63Q05C16 580 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SNTA1Q13424 505 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PDK3Q15120 406 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PPP1R3AQ16821 1122 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 WDR38Q5JTN6 314 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PPM1LQ5SGD2 360 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ACSM5Q6NUN0 579 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ARMCX5Q6P1M9 558 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 STXBP4Q6ZWJ1 553 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ASRGL1Q7L266 308 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FCRLAQ7L513 359 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TSEN54Q7Z6J9 526 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 DHDDSQ86SQ9 333 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ERICH1Q86X53 443 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 LACC1Q8IV20 430 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FGFRL1Q8N441 504 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CHDHQ8NE62 594 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 OR1L3Q8NH93 324 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 NDRG1Q92597 394 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 DNAJC19Q96DA6 116 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SGK494Q96LW2 274 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 LXNQ9BS40 222 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ZNF747Q9BV97 191 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FAM124BQ9H5Z6 455 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 GEMIN7Q9H840 131 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 HEBP1Q9NRV9 189 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 MTCH1Q9NZJ7 389 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PITPNC1Q9UKF7 332 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ALG6Q9Y672 507 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 A0A0C4DFX4 3053 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 IGKV6-21A0A0C4DH24 114 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SPAARA0A1B0GVQ0 90 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PCNX2A6NKB5 2137 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 LRRC30A6NM36 301 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PPIAL4DF5H284 164 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 KIAA0513O60268 411 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 IGLV3-19P01714 112 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FEN1P39748 380 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 SLC1A2P43004 574 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 CASP4P49662 377 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 MRPS21P82921 87 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 MYL7Q01449 175 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 DLG1Q12959 904 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 GK3PQ14409 553 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TRIP11Q15643 1979 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TDRD12Q587J7 1177 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 FFAR4Q5NUL3 377 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ADAMTSL5Q6ZMM2 481 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 C9orf139Q6ZV77 190 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 BZW1Q7L1Q6 419 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 TPRA1Q86W33 373 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 KMT5CQ86Y97 462 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 NELFCDQ8IXH7 590 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 RCOR2Q8IZ40 523 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 PRSS35Q8N3Z0 413 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 OR51G2Q8NGK0 314 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SECTM1Q8WVN6 248 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 ST8SIA1Q92185 356 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 KIFAP3Q92845 792 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SH3YL1Q96HL8 342 aaPredicted RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 SLC38A2Q96QD8 506 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 HSD17B14Q9BPX1 270 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 C11orf70Q9BRQ4 267 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TUBGCP2Q9BSJ2 902 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TMEM121Q9BTD3 319 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 MCRIP2Q9BUT9 160 aaKnown RBP2.21□□□□□ -2.06
MCF2-204ENST00000414978 ZNF160Q9HCG1 818 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 EMCNQ9ULC0 261 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 FBXO7Q9Y3I1 522 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 A0A087WZ39 114 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 IGLV5-52A0A0A0MRZ9 124 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 TCP11X1B4DZS4 312 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 E5RJQ4 531 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 K7ENP7 123 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 IMPA2O14732 288 aa2.21□□□□□ -2.06
MCF2-204ENST00000414978 SPRY3O43610 288 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms