RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 IDH2P48735 452 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 PPOXP50336 477 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 P2RY4P51582 365 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 MAP2K6P52564 334 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 SNRPD2P62316 118 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 SLC35A1P78382 337 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 EMX2Q04743 252 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 ADIPOQQ15848 244 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 LIPNQ5VXI9 398 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 TNFAIP8L2Q6P589 184 aaPredicted RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 ZCCHC23Q6ZST2 131 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 C16orf62Q7Z3J2 963 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 MEX3DQ86XN8 651 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 RFLNBQ8N5W9 214 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 POMGNT2Q8NAT1 580 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 ZNF540Q8NDQ6 660 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 AGR3Q8TD06 166 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 XAGE5Q8WWM1 108 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 CNOT9Q92600 299 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 RAB8BQ92930 207 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 C3orf49Q96BT1 292 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 ROPN1LQ96C74 230 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 C1orf159Q96HA4 380 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 APOPT1Q96IL0 206 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 ZNF385AQ96PM9 386 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 SLC38A2Q96QD8 506 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 KATNB1Q9BVA0 655 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 SF3B5Q9BWJ5 86 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 PIF1Q9H611 641 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 CA10Q9NS85 328 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 TMED7Q9Y3B3 224 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 ARPC4-TTLL3A0A0A6YYG9 625 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SMIM23A6NLE4 172 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 AP3D1O14617 1153 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 KLF11O14901 512 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 LILRA1O75019 489 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SKAP2O75563 359 aaPredicted RBP10.57□□□□□ -0.72
LIMS2-210ENST00000413578 STAMBPO95630 424 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 C1QCP02747 245 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 IGFBP1P08833 259 aaPredicted RBP10.57□□□□□ -0.72
LIMS2-210ENST00000413578 CCNA2P20248 432 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 UQCRC2P22695 453 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 TACR3P29371 465 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SERPINB5P36952 375 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SLC1A3P43003 542 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 POLR2HP52434 150 aaKnown RBP10.57□□□□□ -0.72
LIMS2-210ENST00000413578 NAAAQ02083 359 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SMU1Q2TAY7 513 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 C3orf36Q3SXR2 165 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 TBRG1Q3YBR2 411 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 HMGN2P46Q86SG4 172 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 CMIPQ8IY22 773 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 ARFGAP2Q8N6H7 521 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 OR9K2Q8NGE7 335 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 PMM1Q92871 262 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 DDIT4LQ96D03 193 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 NEURL3Q96EH8 262 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 NAA11Q9BSU3 229 aaPredicted RBP10.57□□□□□ -0.72
LIMS2-210ENST00000413578 ADAM19Q9H013 955 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SLC38A1Q9H2H9 487 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 NELFAQ9H3P2 528 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.57□□□□□ -0.72
LIMS2-210ENST00000413578 SLC17A7Q9P2U7 560 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 MGAM2Q2M2H8 2515 aa10.57□□□□□ -0.72
LIMS2-210ENST00000413578 PRSS51A0A1B0GVH4 220 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 LRP5LA4QPB2 252 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 AGAP5A6NIR3 686 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 LIPT2A6NK58 231 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 AQP7P3A6NL99 342 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 HMGN4O00479 90 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 WIPF1O43516 503 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 TCF21O43680 179 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 IGLV1-44P01699 117 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 OR4A8P0C604 315 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 RPS4Y1P22090 263 aaKnown RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 PAX7P23759 505 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 IL2RGP31785 369 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 PGS1Q32NB8 556 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 IQCCQ4KMZ1 466 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 OTUD3Q5T2D3 398 aaPredicted RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 ATAD3BQ5T9A4 648 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 ANKRD16Q6P6B7 361 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 KLHL24Q6TFL4 600 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 LINGO2Q7L985 606 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 SLC46A3Q7Z3Q1 461 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 TMEM99Q8N816 258 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 FAM169BQ8N8A8 192 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 EIF1ADQ8N9N8 165 aaKnown RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 OR4A15Q8NGL6 344 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 OR1K1Q8NGR3 316 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 MAGEE2Q8TD90 523 aaPredicted RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 BCL2L2Q92843 193 aaPredicted RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 HPS1Q92902 700 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 TESCQ96BS2 214 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 TUBGCP3Q96CW5 907 aa10.56□□□□□ -0.72
LIMS2-210ENST00000413578 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 VRK1Q99986 396 aaPredicted RBP10.56□□□□□ -0.72
LIMS2-210ENST00000413578 RHOXF2Q9BQY4 288 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms