RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 AHSA1O95433 338 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 MT-ATP6P00846 226 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 RAF1P04049 648 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 HRGP04196 525 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 FOSL1P15407 271 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 TCEA1P23193 301 aaKnown RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 IL32P24001 234 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 PRDX6P30041 224 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 DNAJA1P31689 397 aaKnown RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 PCGF2P35227 344 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 MNAT1P51948 309 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 TPD52P55327 224 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 OR2B6P58173 313 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 NCALDP61601 193 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 SIRPAP78324 504 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 SLC17A1Q14916 467 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 STK11Q15831 433 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ADRM1Q16186 407 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 CYP51A1Q16850 503 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 VMACQ2NL98 169 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 C3orf36Q3SXR2 165 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ELOA3BQ3SY89 546 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ANKDD1AQ495B1 522 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 FAM69AQ5T7M9 428 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 C1orf140Q5VVS0 124 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ABLIM2Q6H8Q1 611 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 PRSS57Q6UWY2 283 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 TFAP2EQ6VUC0 442 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 LINC00114Q6XXX2 140 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ZNF836Q6ZNA1 936 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 C20orf204Q6ZNR8 217 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ATG4DQ86TL0 474 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 VRK2Q86Y07 508 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 CDC20BQ86Y33 519 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 MSRB3Q8IXL7 192 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ZZZ3Q8IYH5 903 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 LRRC75A-AS1Q8N1F1 130 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 DEPDC4Q8N2C3 294 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 CLIP4Q8N3C7 705 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 SCAIQ8N9R8 606 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ATP6V1C2Q8NEY4 427 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ELOA3Q8NG57 546 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 OR52E4Q8NGH9 312 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 LINC01560Q8TB33 94 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 PNPT1Q8TCS8 783 aaKnown RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 LZICQ8WZA0 190 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 KISS1RQ969F8 398 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 APH1AQ96BI3 265 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 AURKBQ96GD4 344 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 MARK4Q96L34 752 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 LRR1Q96L50 414 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 HS6ST2Q96MM7 605 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 MUS81Q96NY9 551 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 LINC00470Q9BZP3 86 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 KLHL4Q9C0H6 718 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 PCDHAC1Q9H158 963 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 OPN3Q9H1Y3 402 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 DENND2DQ9H6A0 471 aaPredicted RBP5.68□□□□□ -1.5
USP54-202ENST00000413442 PLEKHF2Q9H8W4 249 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 FGFR1OP2Q9NVK5 253 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 ASB6Q9NWX5 421 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 NDE1Q9NXR1 346 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 SLAMF8Q9P0V8 285 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 MALT1Q9UDY8 824 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 CAPN7Q9Y6W3 813 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 APCP25054 2843 aa5.68□□□□□ -1.5
USP54-202ENST00000413442 TRAV36DV7A0A075B6V5 113 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 CENPVL1A0A0U1RR11 272 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 A0A1W2PNR3 127 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 TMEM72A0PK05 275 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 CYSRT1A8MQ03 144 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 C17orf51A8MQB3 221 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 TMEM229AB2RXF0 380 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 KDM4EB2RXH2 506 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 SHISA8B8ZZ34 492 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 C9JVG2 144 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 DYNC1I1O14576 645 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 MRASO14807 208 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 AIM2O14862 343 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 GCM2O75603 506 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 WNT11O96014 354 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ADAP00813 363 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 BMP4P12644 408 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 PAX1P15863 534 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 ZNF43P17038 809 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 GGT1P19440 569 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 COX5AP20674 150 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 PTAFRP25105 342 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 GTF2E2P29084 291 aaKnown RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 CPOXP36551 454 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 SH3BGRP55822 239 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 RGS8P57771 180 aaPredicted RBP5.67□□□□□ -1.5
USP54-202ENST00000413442 GUCY1A3Q02108 690 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 CEACAM7Q14002 265 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 KEAP1Q14145 624 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 NPTX1Q15818 432 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 NDUFAF6Q330K2 333 aa5.67□□□□□ -1.5
USP54-202ENST00000413442 GTDC1Q4AE62 458 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms