RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TMEM72A0PK05 275 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AP3D1O14617 1153 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SPAG7O75391 227 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 UQCRC2P22695 453 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SERPINF1P36955 418 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 POLR2HP52434 150 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SNRPD2P62316 118 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PLAURQ03405 335 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 FUT5Q11128 374 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SQLEQ14534 574 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC17A1Q14916 467 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 GPAT3Q53EU6 434 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 HIKESHIQ53FT3 197 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MKS1Q9NXB0 559 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 NOP53Q9NZM5 478 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OSGIN1Q9UJX0 560 aa12.43□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SVEP1Q4LDE5 3571 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PRSS51A0A1B0GVH4 220 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ZNF208O43345 1280 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ZNF23P17027 643 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TACR3P29371 465 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SERPINB5P36952 375 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OTUD3Q5T2D3 398 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PAQR6Q6TCH4 344 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AAED1Q7RTV5 226 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SPATA19Q7Z5L4 167 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TMEM99Q8N816 258 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ZIC4Q8N9L1 334 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OR8J2Q8NGG1 315 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TMEM45BQ96B21 275 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AURKBQ96GD4 344 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KCNS3Q9BQ31 491 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MYOZ1Q9NP98 299 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ASIC5Q9NY37 505 aa12.42□□□□□ -0.42
HLA-DQB2-229ENST00000411527 IGHV1-18A0A0C4DH31 117 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ZC3H12DA2A288 527 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PRAMEF27A3QJZ7 478 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 B9A039 149 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SCN2BO60939 215 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KRT33AO76009 404 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AKR7A3O95154 331 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CRYAAP02489 173 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CHI3L1P36222 383 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC1A3P43003 542 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KHKP50053 298 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 HPCAP84074 193 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CEACAM7Q14002 265 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ANXA8L1Q5VT79 327 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SAXO2Q658L1 398 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 VHLLQ6RSH7 139 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ZNF540Q8NDQ6 660 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 VPS37AQ8NEZ2 397 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OR9K2Q8NGE7 335 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KIF18AQ8NI77 898 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TCP10LQ8TDR4 215 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PPP1R36Q96LQ0 422 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ZNF385AQ96PM9 386 aaKnown RBP12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC38A2Q96QD8 506 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SOX7Q9BT81 388 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 DPY30Q9C005 99 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 BPESC1Q9GZL8 116 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CA10Q9NS85 328 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TMEM45AQ9NWC5 275 aa12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MARCOQ9UEW3 520 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQB2-229ENST00000411527 HMGN4O00479 90 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PGRP06401 933 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 GPIP06744 558 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OR4A8P0C604 315 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MAP2K6P52564 334 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OR7A5Q15622 319 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SYPL1Q16563 259 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SMU1Q2TAY7 513 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TBRG1Q3YBR2 411 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ABHD12BQ7Z5M8 362 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 GPAT4Q86UL3 456 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CMIPQ8IY22 773 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ANKFN1Q8N957 763 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 EIF1ADQ8N9N8 165 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 NEURL3Q96EH8 262 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 BOD1Q96IK1 185 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC35A5Q9BS91 424 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SF3B5Q9BWJ5 86 aaKnown RBP12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AKTIPQ9H8T0 292 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OBP2BQ9NPH6 170 aa12.4□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ANK2Q01484 3957 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LRP5LA4QPB2 252 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 AGAP5A6NIR3 686 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LIPT2A6NK58 231 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LGI1O95970 557 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 C1QCP02747 245 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 BPGMP07738 259 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CXCR1P25024 350 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 UBE2NP61088 152 aaKnown RBP12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LGALS3BPQ08380 585 aa12.39□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CASP8Q14790 479 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms