RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 GTF3AQ92664 365 aaKnown RBP3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 UFD1Q92890 307 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 ZNF524Q96C55 264 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 CCDC126Q96EE4 140 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 CSPG4P5Q96PW8 444 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 PANX2Q96RD6 677 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 KCTD14Q9BQ13 255 aaPredicted RBP3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 TEKT3Q9BXF9 490 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 DGCR6LQ9BY27 220 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 IKZF5Q9H5V7 419 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 MYOZ2Q9NPC6 264 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 DMAP1Q9NPF5 467 aaPredicted RBP3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 PXMP2Q9NR77 195 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 SAMSN1Q9NSI8 373 aaKnown RBP3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 ABCD2Q9UBJ2 740 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 WARS2Q9UGM6 360 aaKnown RBP3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 ICAM5Q9UMF0 924 aa3.13□□□□□ -1.91
RNU4-78P-201ENST00000410940 PLEKHH1Q9ULM0 1364 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 AQRO60306 1485 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TRGV8A0A0C4DH27 118 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 A0A1B0GUV1 79 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TMEM120BA0PK00 339 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TRABD2BA6NFA1 517 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 OR5B21A6NL26 309 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 A8MUA0 341 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 E7EWF7 191 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SULT2B1O00204 365 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 WWP2O00308 870 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 PDHXO00330 501 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 CHST1O43916 411 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 UGT1A9O60656 530 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 BMP15O95972 392 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 IGHV3-9P01782 118 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 GAPDHP04406 335 aaKnown RBP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SERPINE2P07093 398 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ABOP16442 354 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 BCL3P20749 454 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 UGT1A4P22310 534 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 HNRNPH3P31942 346 aaKnown RBP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 CCKARP32238 428 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 DDOSTP39656 456 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 MMP12P39900 470 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 POU3F4P49335 361 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 HMGCS2P54868 508 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 FBXW4P57775 412 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ERVK-25P63136 954 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 OR5I1Q13606 314 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ITIH4Q14624 930 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ARL6IP1Q15041 203 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ZNF146Q15072 292 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 CYTH1Q15438 398 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 LTB4RQ15722 352 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 DUSP7Q16829 419 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ISXQ2M1V0 245 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SLC22A6Q4U2R8 563 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 FAM120AOSQ5T036 256 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 PDPK2PQ6A1A2 396 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ARMCX5Q6P1M9 558 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ULK3Q6PHR2 472 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SPESP1Q6UW49 350 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SNX20Q7Z614 316 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TMEM135Q86UB9 458 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 PLA2G4DQ86XP0 818 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 RNF130Q86XS8 419 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 LINC01561Q8N1V8 128 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ZNF843Q8N446 348 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 LIX1Q8N485 282 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ASCC1Q8N9N2 400 aaKnown RBP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 INO80EQ8NBZ0 244 aaPredicted RBP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ZNRF1Q8ND25 227 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TMEM104Q8NE00 496 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SDR9C7Q8NEX9 313 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 OR52H1Q8NGJ2 320 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 PLPPR1Q8TBJ4 325 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SUN5Q8TC36 379 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 CD300LFQ8TDQ1 290 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 HCAR2Q8TDS4 363 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SETD7Q8WTS6 366 aaKnown RBP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 NAT6Q93015 286 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TOP1MTQ969P6 601 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 CERS2Q96G23 380 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 RNF2Q99496 336 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ATF6BQ99941 703 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SYT15Q9BQS2 421 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 HCAR1Q9BXC0 346 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 SLC29A3Q9BZD2 475 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 OCR1Q9BZK8 76 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TM6SF2Q9BZW4 377 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 FBXO44Q9H4M3 255 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 NTN4Q9HB63 628 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ADAP2Q9NPF8 381 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ZC4H2Q9NQZ6 224 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 INPP5EQ9NRR6 644 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 IMPAD1Q9NX62 359 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 TMEM181Q9P2C4 612 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 ZNF282Q9UDV7 671 aaPredicted RBP3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 CD300AQ9UGN4 299 aa3.12□□□□□ -1.91
RNU4-78P-201ENST00000410940 FLVCR2Q9UPI3 526 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms