RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RPS23P62266 143 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SLC35A1P78382 337 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 H3F3AP84243 136 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TEKQ02763 1124 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MVKQ03426 396 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NPRL3Q12980 569 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NAB1Q13506 487 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 DAG1Q14118 895 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 LASP1Q14847 261 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SLC17A1Q14916 467 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SLC9A3R2Q15599 337 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 IMPG1Q17R60 797 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TUSC1Q2TAM9 212 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ARMCX4Q5H9R4 360 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 EXOSC6Q5RKV6 272 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 VAX1Q5SQQ9 334 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 DCST2Q5T1A1 773 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GKAP1Q5VSY0 366 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OLFML2AQ68BL7 652 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TMEM225Q6GV28 225 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CDC73Q6P1J9 531 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 BRICD5Q6PL45 260 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PAQR6Q6TCH4 344 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SYT10Q6XYQ8 523 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GPRIN3Q6ZVF9 776 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RPS27LQ71UM5 84 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SPATC1Q76KD6 591 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GRINAQ7Z429 371 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 REC114Q7Z4M0 266 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 C1QL4Q86Z23 238 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CCDC36Q8IYA8 594 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GSPT2Q8IYD1 628 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 KIR3DL3Q8N743 410 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SPC24Q8NBT2 197 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ANKK1Q8NFD2 765 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OR1K1Q8NGR3 316 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OR4F5Q8NH21 305 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF563Q8TA94 476 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MAGEE2Q8TD90 523 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ADAMTS15Q8TE58 950 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 DCAKDQ8WVC6 231 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 WFDC12Q8WWY7 111 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 BCL2L2Q92843 193 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PMM1Q92871 262 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CDS1Q92903 461 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RAB1CQ92928 201 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RAB8BQ92930 207 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 YIPF5Q969M3 257 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CIDECQ96AQ7 238 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TMEM45BQ96B21 275 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF524Q96C55 264 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PPCDCQ96CD2 204 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 DDIT4LQ96D03 193 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MRRFQ96E11 262 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GIMAP5Q96F15 307 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OTUB1Q96FW1 271 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 AURKBQ96GD4 344 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 C16orf58Q96GQ5 468 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TIMD4Q96H15 378 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF764Q96H86 408 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 C1orf147Q96MC9 270 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ALKBH3Q96Q83 286 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF382Q96SR6 550 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 CITED1Q99966 193 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GAL3ST1Q99999 423 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RBM4BQ9BQ04 359 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MRPL57Q9BQC6 102 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SLC30A2Q9BRI3 323 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SF3B5Q9BWJ5 86 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 C1QTNF3Q9BXJ4 246 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RSPO3Q9BXY4 272 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ACTRT3Q9BYD9 372 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MRPL37Q9BZE1 423 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MS4A7Q9GZW8 240 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 MRPL46Q9H2W6 279 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PIF1Q9H611 641 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF385DQ9H6B1 395 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 BEX1Q9HBH7 125 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NOX3Q9HBY0 568 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 RRAGDQ9NQL2 400 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZCCHC3Q9NUD5 404 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ACER3Q9NUN7 267 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PLEK2Q9NYT0 353 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PDP1Q9P0J1 537 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SH3BP4Q9P0V3 963 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TMEM181Q9P2C4 612 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF69Q9UC07 566 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 OPN4Q9UHM6 478 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZDHHC2Q9UIJ5 367 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 GPR160Q9UJ42 338 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 KLHL21Q9UJP4 597 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF225Q9UK10 706 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 NUP50Q9UKX7 468 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 ZNF346Q9UL40 294 aaKnown RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 PCDHGB4Q9UN71 923 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 FAF1Q9UNN5 650 aaPredicted RBP2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 TRAPPC4Q9Y296 219 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 SNX24Q9Y343 169 aa2.03□□□□□ -2.08
RNU4-53P-201ENST00000410828 POLR3HQ9Y535 204 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms