RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CRTAPO75718 401 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 UGT2B17O75795 530 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SPDEFO95238 335 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 DHFRP00374 187 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 KNG1P01042 644 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CDK1P06493 297 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SLC35G4P0C7Q5 338 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR56A5P0C7T3 313 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SMIM6P0DI80 62 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PSKH1P11801 424 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 IL7P13232 177 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF37AP17032 561 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TCN1P20061 433 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OGNP20774 298 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 S100PP25815 95 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SLC6A6P31641 620 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CCR7P32248 378 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CHRNA7P36544 502 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 EIF2S3P41091 472 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GRIA3P42263 894 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SLCO1A2P46721 670 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TTPAP49638 278 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 P2RY4P51582 365 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CNN1P51911 297 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PGGT1BP53609 377 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 UGT2B15P54855 530 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SPCS3P61009 180 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 E2F1Q01094 437 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CFHR1Q03591 330 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PMS2P3Q13401 168 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ILKQ13418 452 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TP53BP2Q13625 1128 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GPR18Q14330 331 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GK3PQ14409 553 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 USP10Q14694 798 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 KIR2DS5Q14953 304 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 RTP5Q14D33 572 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 AANATQ16613 207 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ISXQ2M1V0 245 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 EIF2S3LQ2VIR3 472 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SYTL3Q4VX76 610 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 FAM98BQ52LJ0 330 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 METRNLQ641Q3 311 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 KDM4DQ6B0I6 523 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PTRHD1Q6GMV3 140 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 LRRC8EQ6NSJ5 796 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 LCTLQ6UWM7 567 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM26Q6ZUK4 368 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GALNT10Q86SR1 603 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM135Q86UB9 458 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 LHFPL3Q86UP9 236 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PIM3Q86V86 326 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CPNE9Q8IYJ1 553 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PDIK1LQ8N165 341 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 RNF148Q8N7C7 305 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 FBXO36Q8NEA4 188 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR4M1Q8NGD0 313 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR5AR1Q8NGP9 310 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR9A1PQ8NGU1 263 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR10G6Q8NH81 332 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 MAGEE2Q8TD90 523 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SLC26A7Q8TE54 656 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OIT3Q8WWZ8 545 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 RPL3LQ92901 407 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SNAPC3Q92966 411 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 FAM46BQ96A09 425 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PHF21AQ96BD5 680 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 MSI2Q96DH6 328 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 MARS2Q96GW9 593 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF514Q96K75 400 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 MUS81Q96NY9 551 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TGM7Q96PF1 710 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR5M11Q96RB7 305 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 DCLRE1CQ96SD1 692 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GPA33Q99795 319 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 EBNA1BP2Q99848 306 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 C19orf43Q9BQ61 176 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 SYT3Q9BQG1 590 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF251Q9BRH9 671 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 BDH2Q9BUT1 245 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PKIBQ9C010 78 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 NMUR2Q9GZQ4 415 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 OR52A5Q9H2C5 316 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 PPIL3Q9H2H8 161 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TOR3AQ9H497 397 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 MVB12BQ9H7P6 319 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ACTR8Q9H981 624 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 EFCAB1Q9HAE3 211 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 MRPS30Q9NP92 439 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TRIM36Q9NQ86 728 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ZCCHC3Q9NUD5 404 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CCDC59Q9P031 241 aaKnown RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM216Q9P0N5 145 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GALPQ9UBC7 116 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 CD300AQ9UGN4 299 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ELF5Q9UKW6 265 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-202ENST00000409915 GPR132Q9UNW8 380 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 ERVK-19Q9WJR5 959 aa4.18□□□□□ -1.74
SF3B1-202ENST00000409915 NDUFAF1Q9Y375 327 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms