RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 C3orf49Q96BT1 292 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 EFHD2Q96C19 240 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ZC3H10Q96K80 434 aaKnown RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 PSMG3-AS1Q96PY0 264 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 MED18Q9BUE0 208 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 CDADC1Q9BWV3 514 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 VN1R1Q9GZP7 353 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 LAT2Q9GZY6 243 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ERVK13-1Q9NX77 482 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 MUTYHQ9UIF7 546 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 MKL2Q9ULH7 1088 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 GSTK1Q9Y2Q3 226 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF337Q9Y3M9 751 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 SPIN1Q9Y657 262 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 SEC16AO15027 2179 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ISPDA4D126 451 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 OR2W5A6NFC9 320 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ALG1L2C9J202 215 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 GTPBP1O00178 669 aaKnown RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ARPC3O15145 178 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 CBFA2T3O75081 653 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 RFPL3O75679 317 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 CER1O95813 267 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 APEHP13798 732 aaKnown RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 CD53P19397 219 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 IL12BP29460 328 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 NOS3P29474 1203 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 FGF9P31371 208 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ETV6P41212 452 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 SOX3P41225 446 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 RORCP51449 518 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 DUSP3P51452 185 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 RUNX1T1Q06455 604 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ITGADQ13349 1161 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 NNATQ16517 81 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 HLA-BQ31612 363 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 VWA2Q5GFL6 755 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 LIPKQ5VXJ0 399 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 PLBD1Q6P4A8 553 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 CD200R1LQ6Q8B3 271 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 TSSK4Q6SA08 328 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 DPY19L2P2Q6ZN68 376 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 IGFN1Q86VF2 1251 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 MISPQ8IVT2 679 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 GPALPP1Q8IXQ4 340 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 SLC37A3Q8NCC5 494 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 PHOSPHO1Q8TCT1 267 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 GPX7Q96SL4 187 aaPredicted RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 SECISBP2Q96T21 854 aaKnown RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 NUDT9Q9BW91 350 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 WWTR1Q9GZV5 400 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 NUAK2Q9H093 628 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 LRRN3Q9H3W5 708 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 MCCC2Q9HCC0 563 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 EXOSC4Q9NPD3 245 aaKnown RBP6.85□□□□□ -1.31
CXCR4-202ENST00000409817 RARRES3Q9UL19 164 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 PCDHGB6Q9Y5F9 930 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 ADAMTS20P59510 1910 aa6.85□□□□□ -1.31
CXCR4-202ENST00000409817 TRAV27A0A087WT01 109 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 LY6G6EA0A0G2JKS1 128 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 TRDV1A0A1B0GX56 115 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 CPED1A4D0V7 1026 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 ANKRD34BA5PLL1 514 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 J3QRK9 145 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 SIGLEC6O43699 453 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 TSPAN2O60636 221 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 REM1O75628 298 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 SULT1C4O75897 302 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 OR7A10O76100 309 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 SLC2A10O95528 541 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 HLA-DPB1P04440 258 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 FUT1P19526 365 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 GRK6P43250 576 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 NRG3P56975 720 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 TAS2R43P59537 309 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 RPS3AP61247 264 aaKnown RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 RPS4XP62701 263 aaKnown RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 DCDP81605 110 aaKnown RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 LGALS3BPQ08380 585 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 PLCXD2Q0VAA5 305 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 TRA2AQ13595 282 aaKnown RBP eCLIP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 FHL1Q13642 323 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 TRAM1Q15629 374 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 LCN1P1Q5VSP4 162 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 GUSBP11Q6P575 273 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 PAQR6Q6TCH4 344 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF322Q6U7Q0 402 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF574Q6ZN55 896 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 ATG4DQ86TL0 474 aaPredicted RBP6.84□□□□□ -1.31
CXCR4-202ENST00000409817 GATAD2AQ86YP4 633 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 EGFL6Q8IUX8 553 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 C9orf40Q8IXQ3 194 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 ZNF441Q8N8Z8 693 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 POMGNT2Q8NAT1 580 aa6.84□□□□□ -1.31
CXCR4-202ENST00000409817 OR51A7Q8NH64 312 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms