RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 ADH7P40394 386 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 TSPAN7P41732 249 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 HMGCS1Q01581 520 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 TCTN1Q2MV58 587 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 TMEM176BQ3YBM2 270 aaPredicted RBP6.79□□□□□ -1.32
SCN9A-202ENST00000409435 OR5M10Q6IEU7 315 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 TIPARPQ7Z3E1 657 aaKnown RBP6.79□□□□□ -1.32
SCN9A-202ENST00000409435 OR4F6Q8NGB9 312 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 OR52J3Q8NH60 311 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 HAS2Q92819 552 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 CLDN23Q96B33 292 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 RAB1BQ9H0U4 201 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 ATG5Q9H1Y0 275 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 CBLCQ9ULV8 474 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 LIPT1Q9Y234 373 aa6.79□□□□□ -1.32
SCN9A-202ENST00000409435 C1orf105O95561 183 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SOX8P57073 446 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RPS18P62269 152 aaKnown RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RPS27AP62979 156 aaKnown RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 UBA52P62987 128 aaKnown RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 HNRNPA0Q13151 305 aaKnown RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 MRGPRGQ86SM5 289 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 YRDCQ86U90 279 aaKnown RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PPM1MQ96MI6 270 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 C12orf57Q99622 126 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 DDA1Q9BW61 102 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PINK1Q9BXM7 581 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 C14orf119Q9NWQ9 140 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SBF2Q86WG5 1849 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 A0A0U1RQK1 487 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 LOC102725191A0A1B0GVB3 256 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PRKYO43930 277 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CCL4P13236 92 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 FPR1P21462 350 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 UQCRC2P22695 453 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 EDNRAP25101 427 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RFC3P40938 356 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 ART1P52961 327 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PMPCAQ10713 525 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OR8B8Q15620 311 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 NTRK2Q16620 822 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 TMEM236Q5W0B7 351 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 KCTD18Q6PI47 426 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 ABHD11Q8NFV4 315 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 FANK1Q8TC84 345 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 GTF2H4Q92759 462 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 UBE2FQ969M7 185 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SPTSSAQ969W0 71 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PGAM5Q96HS1 289 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SLC12A9Q9BXP2 914 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CTPS2Q9NRF8 586 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OCIAD1Q9NX40 245 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 KLK13Q9UKR3 277 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OR51B4Q9Y5P0 310 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 POLR2AP24928 1970 aaKnown RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CXCR6O00574 342 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RCBTB2O95199 551 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 HTR3BO95264 441 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 MT-ND2P03891 347 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SERPINA7P05543 415 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PNLIPP16233 465 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 LTBRP36941 435 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 FASLGP48023 281 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OR12D2P58182 307 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 C17orf67Q0P5P2 114 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OR7A5Q15622 319 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 B3GNTL1Q67FW5 361 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CLEC6AQ6EIG7 209 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CLEC2AQ6UVW9 174 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 PAQR9Q6ZVX9 377 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 ZNF101Q8IZC7 436 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CDRT4Q8N9R6 151 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OR2T35Q8NGX2 323 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CHPT1Q8WUD6 406 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 ALG3Q92685 438 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 BSCL2Q96G97 398 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SMCO4Q9NRQ5 59 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CNIH4Q9P003 139 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 TCFL5Q9UL49 500 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OR5H15A6NDH6 313 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OTOL1A6NHN0 477 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 NRG2O14511 850 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-202ENST00000409435 HPP00738 406 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RAB6AP20340 208 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CD34P28906 385 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 GNRHRP30968 328 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 OPRM1P35372 400 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 SH3BP2P78314 561 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CLDN10P78369 228 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 COQ5Q5HYK3 327 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RPL13AP3Q6NVV1 102 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 ASCL5Q7RTU5 278 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 DNAJB8Q8NHS0 232 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 C11orf40Q8WZ69 217 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 RHNO1Q9BSD3 238 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CXCL16Q9H2A7 254 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 CNTN6Q9UQ52 1028 aa6.78□□□□□ -1.32
SCN9A-202ENST00000409435 TESMINQ9Y4I5 508 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms