RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CCR6P51684 374 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 P2RX3P56373 397 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 RPS15AP62244 130 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 CD300LDQ6UXZ3 194 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 FGD2Q7Z6J4 655 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 NR2C2APQ86WQ0 139 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 TOR1AIP2Q8NFQ8 470 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 TRIM2Q9C040 744 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 FREM2Q5SZK8 3169 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 A0A1B0GWA3 101 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 G3V3Y1 287 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 SELENOFO60613 162 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 LIPCP11150 499 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 GABRG2P18507 467 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 GIFP27352 417 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 SSTR2P30874 369 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 NR0B1P51843 470 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 TRA2BP62995 288 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 ABATP80404 500 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 FAM53BQ14153 422 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 WDR88Q6ZMY6 472 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 MCATQ8IVS2 390 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 TMEM151BQ8IW70 566 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 ZNF321PQ8N8H1 164 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 C17orf47Q8NEP4 570 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 OR8S1Q8NH09 359 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 SLC22A18Q96BI1 424 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 RAB11FIP5Q9BXF6 653 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 KIR3DX1Q9H7L2 352 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
COL6A2-204ENST00000409416 OR6C2Q9NZP2 312 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 POLHQ9Y253 713 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 WDFY3Q8IZQ1 3526 aa12.34□□□□□ -0.43
COL6A2-204ENST00000409416 MUC3AQ02505 3323 aa12.33□□□□□ -0.43
COL6A2-204ENST00000409416 A0A087WV48 116 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 H3BML4 177 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 DHFRP00374 187 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 FGF9P31371 208 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 KIR2DL1P43626 348 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 TNFRSF17Q02223 184 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 LUZP2Q86TE4 346 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 POGLUT1Q8NBL1 392 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF431Q8TF32 576 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 HS6ST2Q96MM7 605 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 NUDT22Q9BRQ3 303 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MED18Q9BUE0 208 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MTHFD2LQ9H903 347 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 CENPMQ9NSP4 180 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 KIF26BQ2KJY2 2108 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 KIAA1671Q9BY89 1806 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 CLDN4O14493 209 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 TBX19O60806 448 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 ZNF780AO75290 641 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MT-ND4P03905 459 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MT-ND5P03915 603 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 AQP2P41181 271 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 GZMKP49863 264 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 AP2S1P53680 142 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 DECR1Q16698 335 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 YIF1BQ5BJH7 314 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MEPCEQ7L2J0 689 aaKnown RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 ESX1Q8N693 406 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 SFXN5Q8TD22 340 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 GAL3ST3Q96A11 431 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 RNF170Q96K19 258 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 ARHGDIGQ99819 225 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 PHF11Q9UIL8 331 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 SLC19A2O60779 497 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 ALX3O95076 343 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 DCNP07585 359 aaKnown RBP12.33□□□□□ -0.44
COL6A2-204ENST00000409416 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 GAS6Q14393 721 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 SFXN4Q6P4A7 337 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MFSD9Q8NBP5 474 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 LRRC20Q8TCA0 184 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 MGAT4AQ9UM21 535 aa12.33□□□□□ -0.44
COL6A2-204ENST00000409416 A0A0A6YYJ9 748 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 TRBV2A0A0J9YWF9 115 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 TRAPPC13A5PLN9 417 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 C2CD4DB7Z1M9 353 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 SYT5O00445 386 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 RLN1P04808 185 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 ERGP11308 486 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 PITPNBP48739 271 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 AKR1D1P51857 326 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 NSDHLQ15738 373 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 ACSM3Q53FZ2 586 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 NIPAL3Q6P499 406 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 LEG1Q6P5S2 330 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 OR5M1Q8NGP8 315 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 ZFAND1Q8TCF1 268 aa12.32□□□□□ -0.44
COL6A2-204ENST00000409416 DNAJA4Q8WW22 397 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms