RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HMGCLP35914 325 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PPP1R2P41236 205 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 DAP3P51398 398 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 MRPS15P82914 257 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 CDK16Q00536 496 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 TGM3Q08188 693 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 VGLL4Q14135 290 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 ARHGAP19Q14CB8 494 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 ISXQ2M1V0 245 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 KLHL38Q2WGJ6 581 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PPP1R2P3Q6NXS1 205 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 BIVMQ86UB2 503 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 ERO1BQ86YB8 467 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR9A1PQ8NGU1 263 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PHOSPHO2Q8TCD6 241 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 MRPS31Q92665 395 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 FRAT1Q92837 279 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 SGK3Q96BR1 496 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 TM4SF19Q96DZ7 209 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 KCNA7Q96RP8 456 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 IL4I1Q96RQ9 567 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 SIKE1Q9BRV8 207 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 RAB34Q9BZG1 259 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF385DQ9H6B1 395 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 NARFLQ9H6Q4 476 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 SYNDIG1Q9H7V2 258 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PSTPIP2Q9H939 334 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PANK3Q9H999 370 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 LY9Q9HBG7 655 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PHF11Q9UIL8 331 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PSME2Q9UL46 239 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PDE10AQ9Y233 779 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 CSDC2Q9Y534 153 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PCNX3Q9H6A9 2034 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 COL2A1P02458 1487 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 A0A1B0GWB2 263 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 FRG2CA6NGY1 282 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR2AG2A6NM03 316 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF705EA8MWA4 302 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SHISA9B4DS77 424 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 TRDCB7Z8K6 153 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 CDX4O14627 284 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ABCD4O14678 606 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SPOPO43791 374 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR10H3O60404 316 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 PFKFB2O60825 505 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 GPX5O75715 221 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 CABYRO75952 493 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ATP5LO75964 103 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 KBTBD11O94819 623 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ERLIN2O94905 339 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 KRT6AP02538 564 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 S100A9P06702 114 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ANXA8P13928 327 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 COX5AP20674 150 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 HMGB2P26583 209 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 FGF9P31371 208 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 CASP14P31944 242 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 YWHABP31946 246 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 OPRD1P41143 372 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 XCR1P46094 333 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 GYG1P46976 350 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 MNAT1P51948 309 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 PLP1P60201 277 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 MRPS11P82912 194 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 DR1Q01658 176 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SPAG1Q07617 926 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SLC10A1Q14973 349 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF77Q15935 545 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 Q3ZCU0 254 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 XKR7Q5GH72 579 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ANXA8L1Q5VT79 327 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF343Q6P1L6 599 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 TMEM53Q6P2H8 277 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 RNASEKQ6P5S7 137 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ENPP6Q6UWR7 440 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 C6orf89Q6UWU4 347 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SVOPLQ8N434 492 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR8K3Q8NH51 312 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 FAM110BQ8TC76 370 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZBED6CLQ96FA7 236 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 CHP1Q99653 195 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 RBM4BQ9BQ04 359 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SLITRK2Q9H156 845 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 NIPAL2Q9H841 368 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 NEK6Q9HC98 313 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 NT5MQ9NPB1 228 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ARMCX1Q9P291 453 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 WARS2Q9UGM6 360 aaKnown RBP3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 SLC7A8Q9UHI5 535 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ATPIF1Q9UII2 106 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 ABCG2Q9UNQ0 655 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 PEX16Q9Y5Y5 336 aa3.81□□□□□ -1.8
HMGB1P13-201ENST00000406019 BAZ1BQ9UIG0 1483 aaKnown RBP3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 CCT8L1PA6NM43 557 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 E9PAM4 449 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 GOLGA8SH3BPF8 625 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 SULT2B1O00204 365 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 NVLO15381 856 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms