RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MYLK2Q9H1R3 596 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GMPR2Q9P2T1 348 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RPS6KB2Q9UBS0 482 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC13A4Q9UKG4 626 aa12.52□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CREBBPQ92793 2442 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 FAM221AA4D161 298 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LIPT2A6NK58 231 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A8MVM7 634 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TMEM229AB2RXF0 380 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NPIPB7O75200 414 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 AKR7A3O95154 331 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 LGI1O95970 557 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NTF4P34130 210 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 IDUAP35475 653 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC35A1P78382 337 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 EGR4Q05215 589 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 BEND4Q6ZU67 534 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PATL1Q86TB9 770 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RBM45Q8IUH3 476 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 BHLHE22Q8NFJ8 381 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR4D11Q8NGI4 311 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZC3HAV1LQ96H79 300 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 DACH2Q96NX9 599 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 POTEKPQ9BYX7 375 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RASSF1Q9NS23 344 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CMTM6Q9NX76 183 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NDRG3Q9UGV2 375 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
HLA-DQB1-202ENST00000399079 IGKV3D-15A0A087WSY6 115 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ELOA3DA6NLF2 546 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ZNF724A8MTY0 619 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 DNPH1O43598 174 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GPIP06744 558 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CD247P20963 164 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PTNP21246 168 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PCYT1AP49585 367 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NCALDP61601 193 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 DAZAP2Q15038 168 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 POU4F3Q15319 338 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR1Q1Q15612 314 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TSC22D1Q15714 1073 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ELOA3BQ3SY89 546 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ALG10BQ5I7T1 473 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 INTS11Q5TA45 600 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C1orf140Q5VVS0 124 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CCDC80Q76M96 950 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GALNT5Q7Z7M9 940 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC30A8Q8IWU4 369 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 GABRG1Q8N1C3 465 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TMEM99Q8N816 258 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ELOA3Q8NG57 546 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR6T1Q8NGN1 323 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 VANGL1Q8TAA9 524 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC26A7Q8TE54 656 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 POLDIP3Q9BY77 421 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TRIM2Q9C040 744 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CLEC4MQ9H2X3 399 aaPredicted RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TESQ9UGI8 421 aaKnown RBP12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PRSS50Q9UI38 385 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TESMINQ9Y4I5 508 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ABCA4P78363 2273 aa12.5□□□□□ -0.41
HLA-DQB1-202ENST00000399079 AKAP6Q13023 2319 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 EIF1BO60739 113 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 IGHV3-9P01782 118 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR3A2P47893 321 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PDK3Q15120 406 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NPTX1Q15818 432 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NRF1Q16656 503 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ULK3Q6PHR2 472 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PAQR6Q6TCH4 344 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CXorf67Q86X51 503 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC15A3Q8IY34 581 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 OR2T12Q8NG77 320 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PIGXQ8TBF5 258 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 DNAJA4Q8WW22 397 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC25A36Q96CQ1 311 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ARHGDIGQ99819 225 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TACO1Q9BSH4 297 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 PTDSS2Q9BVG9 487 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 EFCAB1Q9HAE3 211 aa12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C6orf203Q9P0P8 240 aaPredicted RBP12.49□□□□□ -0.41
HLA-DQB1-202ENST00000399079 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 A0A1B0GX12 115 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CASKO14936 926 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SIAH2O43255 324 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 ADAP00813 363 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 C8BP07358 591 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 TNFRSF1BP20333 461 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 NUDT2P50583 147 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 SLC16A1P53985 500 aa12.48□□□□□ -0.41
HLA-DQB1-202ENST00000399079 CDH12P55289 794 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms