RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 STARP49675 285 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 GK2Q14410 553 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SHEQ5VZ18 495 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TFAP2EQ6VUC0 442 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 FRRS1Q6ZNA5 592 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SHISA5Q8N114 240 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 C2CD4CQ8TF44 421 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SCARB1Q8WTV0 552 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 WDR34Q96EX3 536 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC35A4Q96G79 324 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PAWRQ96IZ0 340 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TNFRSF13CQ96RJ3 184 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 DPYSL5Q9BPU6 564 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MFFQ9GZY8 342 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ACSS1Q9NUB1 689 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 FBXO34Q9NWN3 711 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PCDHB10Q9UN67 800 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 CA5BQ9Y2D0 317 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 LOC100509620A0A075B734 347 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 OR2W5A6NFC9 320 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 WASH3PC4AMC7 463 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MTRF1O75570 445 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 RPLP1P05386 114 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 CSN2P05814 226 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 LAMP2P13473 410 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SYN1P17600 705 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 CSNK2A2P19784 350 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MPIP34949 423 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PTH2RP49190 550 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MC2RQ01718 297 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ACSM1Q08AH1 577 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 C21orf62-AS1Q17RA5 79 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEM44Q2T9K0 475 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 NDUFAF6Q330K2 333 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF805Q5CZA5 627 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 OR7E24Q6IFN5 339 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MRGPREQ86SM8 312 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ADIPOR2Q86V24 386 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 AMZ2Q86W34 360 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 KLHDC8AQ8IYD2 350 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 CDK20Q8IZL9 346 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ZFP82Q8N141 532 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ACOT4Q8N9L9 421 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 OR10Z1Q8NGY1 313 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC25A28Q96A46 364 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TCEAL4Q96EI5 215 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 C12orf57Q99622 126 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEM185BQ9H7F4 350 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 GPN1Q9HCN4 374 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ATPIF1Q9UII2 106 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC22A31A6NKX4 558 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 D6RAR5 112 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 LINC01387J3KSC0 135 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PEX12O00623 359 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MAN2B1O00754 1011 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 NARSO43776 548 aaKnown RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PRICKLE3O43900 615 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ARL6IP5O75915 188 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 RASGRP1O95267 797 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 LRG1P02750 347 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PCCBP05166 539 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 NRG3P56975 720 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PLA2G7Q13093 441 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MAPK14Q16539 360 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 DECR1Q16698 335 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PCGF3Q3KNV8 242 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 RNFT1Q5M7Z0 435 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 FAM111BQ6SJ93 734 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 GLDNQ6ZMI3 551 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 C1orf229Q6ZS94 237 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 OR4D10Q8NGI6 311 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 DUSP19Q8WTR2 217 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEM239Q8WW34 195 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 KISS1RQ969F8 398 aaPredicted RBP9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 PELI1Q96FA3 418 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ZCCHC4Q9H5U6 513 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 BCL2L10Q9HD36 194 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 MOKQ9UQ07 419 aa9.1□□□□□ -0.95
PTCHD4-202ENST00000398738 ABHD14A-ACY1A0A1B0GW23 586 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ZNF860A6NHJ4 632 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 SMAD7O15105 426 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 KCNAB3O43448 404 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 PQBP1O60828 265 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 ATG12O94817 140 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 MAS1P04201 325 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 VSIG10L2P0DP72 767 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 GABRA1P14867 456 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 CDK2P24941 298 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 BMP8BP34820 402 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 RAP2BP61225 183 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 BMP8AQ7Z5Y6 402 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 TMEM185AQ8NFB2 350 aa9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 BRIX1Q8TDN6 353 aaKnown RBP9.09□□□□□ -0.95
PTCHD4-202ENST00000398738 SETD7Q8WTS6 366 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms