RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 KIAA0513O60268 411 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ALOX12BO75342 701 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CAPNS1P04632 268 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ELK4P28324 431 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 VBP1P61758 197 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CYCSP99999 105 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 UBE2UQ5VVX9 321 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CWF19L1Q69YN2 538 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 OR9Q2Q8NGE9 314 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MYLIPQ8WY64 445 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 INTS12Q96CB8 462 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A36Q96CQ1 311 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LAT2Q9GZY6 243 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LRRN3Q9H3W5 708 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MCCC2Q9HCC0 563 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 INIPQ9NRY2 104 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DNAJC27Q9NZQ0 273 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GPR55Q9Y2T6 319 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TRAV36DV7A0A075B6V5 113 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 A0A087WUU8 490 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TRDV1A0A1B0GX56 115 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1W2PPW3 197 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 B4E171 279 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 KCNK2O95069 426 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CLIC3O95833 236 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DNASE1L1P49184 302 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PHC1P78364 1004 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CSTF1Q05048 431 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 AKAP14Q86UN6 197 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 YIPF7Q8N8F6 280 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CDS1Q92903 461 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CLDN23Q96B33 292 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TM4SF19Q96DZ7 209 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SH3YL1Q96HL8 342 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LRP3O75074 770 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LINC00271P0C7V0 271 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 UBCP0CG48 685 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 IHHQ14623 411 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PYDC2Q56P42 97 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 THEM4Q5T1C6 240 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM92Q6UXU6 159 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 THEM6Q8WUY1 208 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CMTM3Q96MX0 182 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 USB1Q9BQ65 265 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC38A1Q9H2H9 487 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 IKZF5Q9H5V7 419 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GLS2Q9UI32 602 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TMPRSS11EQ9UL52 423 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CBLP22681 906 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 WNT3P56703 355 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SQSTM1Q13501 440 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 AQP6Q13520 282 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 IER5LQ5T953 404 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RAET1LQ5VY80 246 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TCEAL6Q6IPX3 200 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF322Q6U7Q0 402 aaPredicted RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CPOQ8IVL8 374 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 UEVLDQ8IX04 471 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CNIH3Q8TBE1 160 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 KLHL25Q9H0H3 589 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TNFRSF12AQ9NP84 129 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PTRH2Q9Y3E5 179 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1B0GVI7 797 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1B0GVT2 93 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TCRBV5S2A0A599 114 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PRAF2O60831 178 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 BMP4P12644 408 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 NPR2P20594 1047 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 LTB4RQ15722 352 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MPEG1Q2M385 716 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 LIPKQ5VXJ0 399 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 PRICKLE2Q7Z3G6 844 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ARIH2OSQ8N7S6 290 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR10Q1Q8NGQ4 319 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 C7orf34Q96L11 122 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TECTBQ96PL2 329 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 WACQ9BTA9 647 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF768Q9H5H4 540 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 UCKL1Q9NWZ5 548 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 NUFIP1Q9UHK0 495 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 DHDHQ9UQ10 334 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 WDR37Q9Y2I8 494 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 TBX1O43435 398 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 GPR4P46093 362 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 EEF1A1P68104 462 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 EEF1A2Q05639 463 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 EEF1A1P5Q5VTE0 462 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 MEPCEQ7L2J0 689 aaKnown RBP3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR4N5Q8IXE1 308 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR52E2Q8NGJ4 325 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OR5L1Q8NGL2 311 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ASB13Q8WXK3 278 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 OMA1Q96E52 524 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 ACAD8Q9UKU7 415 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SESN1Q9Y6P5 492 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A0U1RQS6 177 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1W2PQD3 144 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 RFXAPO00287 272 aa3.12□□□□□ -1.91
VPS13C-203ENST00000395896 SIGLEC6O43699 453 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms