RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ACSS1Q9NUB1 689 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 PLCXD1Q9NUJ7 323 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 DCAF16Q9NXF7 216 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 WSB2Q9NYS7 404 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 POMT2Q9UKY4 750 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 RASD1Q9Y272 281 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 C13orf42A0A1B0GVH6 325 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 FAM86C2PA6NEL3 165 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 C9J4A7 227 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CDC40O60508 579 aaKnown RBP eCLIP5.28□□□□□ -1.56
RFFL-202ENST00000394597 CDC123O75794 336 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 WISP3O95389 354 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 LY86O95711 162 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CSN2P05814 226 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 FURINP09958 794 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 GABRA3P34903 492 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 GUCA1AP43080 201 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 SRP9P49458 86 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 CSRP3P50461 194 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 RPS25P62851 125 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 RPS27AP62979 156 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 UBA52P62987 128 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 HBA1P69905 142 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ST3GAL3Q11203 375 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 DECR1Q16698 335 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 C8orf82Q6P1X6 216 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 DLEU7Q6UYE1 221 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TMUB2Q71RG4 321 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 IQCF1Q8N6M8 205 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ACBD4Q8NC06 268 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 OR51G2Q8NGK0 314 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SLC37A2Q8TED4 501 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 NUDT8Q8WV74 236 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 YIPF5Q969M3 257 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TM4SF18Q96CE8 201 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TCTN2Q96GX1 697 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CXorf58Q96LI9 332 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 MARVELD1Q9BSK0 173 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 NOX3Q9HBY0 568 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZNF225Q9UK10 706 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 CDH10Q9Y6N8 788 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 METTL12A8MUP2 240 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 LINC00587B1AMM8 73 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 J3QLW9 94 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 GPR171O14626 319 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZNF19P17023 458 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 FBLP22087 321 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 VAMP1P23763 118 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 PCGF2P35227 344 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 NRG3P56975 720 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 EEF1A1P68104 462 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 SORDQ00796 357 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 E2F1Q01094 437 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 EEF1A2Q05639 463 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 COTL1Q14019 142 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ETFDHQ16134 617 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 NKG7Q16617 165 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 PLK5Q496M5 336 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 EEF1A1P5Q5VTE0 462 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 QSOX2Q6ZRP7 698 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 WDR53Q7Z5U6 358 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 TMEM200AQ86VY9 491 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CCDC71Q8IV32 467 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 SIAH3Q8IW03 269 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CCL4L1Q8NHW4 92 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SUN3Q8TAQ9 357 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SNX33Q8WV41 574 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 EDAQ92838 391 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TMEM19Q96HH6 336 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 CDX2Q99626 313 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 CPPED1Q9BRF8 314 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 ACTRT3Q9BYD9 372 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 PIGMQ9H3S5 423 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 NMNAT1Q9HAN9 279 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 STARD5Q9NSY2 213 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ZNF629Q9UEG4 869 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 KLF15Q9UIH9 416 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ATXN7L1Q9ULK2 861 aaPredicted RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 ICKQ9UPZ9 632 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 RCE1Q9Y256 329 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 FADS1O60427 444 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SCN2BO60939 215 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 RBBP9O75884 186 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 IFNGP01579 166 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 IFNA6P05013 189 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 OSMP13725 252 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 PSMB1P20618 241 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 GSTM3P21266 225 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 BCL6P41182 706 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TSFMP43897 325 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 KCNJ3P48549 501 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 PRKXP51817 358 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SEC61A1P61619 476 aaKnown RBP5.28□□□□□ -1.56
RFFL-202ENST00000394597 SELENOWP63302 87 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 ACY1Q03154 408 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 SCGB2B2Q4G0G5 96 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 TMEM164Q5U3C3 297 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 FAM219BQ5XKK7 198 aa5.28□□□□□ -1.56
RFFL-202ENST00000394597 FAM71E1Q6IPT2 247 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms