RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 GAGE12FP0CL80 117 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 GAGE12GP0CL81 117 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 GAGE12IP0CL82 117 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF250P15622 560 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF43P17038 809 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 RPL35AP18077 110 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PMCHP20382 165 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CA6P23280 308 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 IL32P24001 234 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 EDNRAP25101 427 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ATP5A1P25705 553 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PRDX3P30048 256 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CEACAM3P40198 252 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 RBM34P42696 430 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 NSG1P42857 185 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 MAGEA6P43360 314 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR3A2P47893 321 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KCNJ3P48549 501 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PCYT1AP49585 367 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 SERPINB8P50452 374 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PDLIM4P50479 330 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FOXG1P55316 489 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PKNOX1P55347 436 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CLDN18P56856 261 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 UBE2KP61086 200 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ERVK11-1P61568 191 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 HERV-K104P61576 105 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 SEC61A1P61619 476 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PSMC5P62195 406 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 RPS6P62753 249 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KCNJ2P63252 427 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CDR2Q01850 454 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PLOD1Q02809 727 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PLP2Q04941 152 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KDSRQ06136 332 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 DLG1Q12959 904 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 GAGE1Q13065 139 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 GAGE4Q13068 117 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FOXE3Q13461 319 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 TUBA3CQ13748 450 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KIR2DS3Q14952 304 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OXA1LQ15070 435 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 MAPRE2Q15555 327 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CD226Q15762 336 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FAM189A2Q15884 450 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF124Q15973 351 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 BCL2A1Q16548 175 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KYAT1Q16773 422 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KCTD19Q17RG1 926 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KLHL38Q2WGJ6 581 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 TRIM16LQ309B1 348 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 MS4A18Q3C1V0 323 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 TIGITQ495A1 244 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FAM106AQ4KMX7 169 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 COQ5Q5HYK3 327 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PPM1LQ5SGD2 360 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 UTF1Q5T230 341 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 BEND3Q5T5X7 828 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 HECTD2Q5U5R9 776 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 IGFL4Q6B9Z1 124 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CLEC6AQ6EIG7 209 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 SLC18B1Q6NT16 456 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 APOBEC3HQ6NTF7 200 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 TUBA3EQ6PEY2 450 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 SHC4Q6S5L8 630 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ADAMTSL5Q6ZMM2 481 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 STAC2Q6ZMT1 411 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 LRRC74BQ6ZQY2 392 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FCRLAQ7L513 359 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 APTXQ7Z2E3 356 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PID1Q7Z2X4 250 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PTAR1Q7Z6K3 402 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 MRPL10Q7Z7H8 261 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 MOB3BQ86TA1 216 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 PIGZQ86VD9 579 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 TMEM17Q86X19 198 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 APOBEC3FQ8IUX4 373 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CCDC71Q8IV32 467 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FUNDC1Q8IVP5 155 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 SLC35F2Q8IXU6 374 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZBED8Q8IZ13 594 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KIRREL3Q8IZU9 778 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 KIF2BQ8N4N8 673 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 FAM89BQ8N5H3 189 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 RNF10Q8N5U6 811 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 TRAM1L1Q8N609 369 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 GVQW1Q8N7I0 195 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 RBMXL3Q8N7X1 1067 aaKnown RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNF441Q8N8Z8 693 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 CDRT4Q8N9R6 151 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZSCAN4Q8NAM6 433 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 INO80EQ8NBZ0 244 aaPredicted RBP1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ZNRF1Q8ND25 227 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 ICA1LQ8NDH6 482 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR2T33Q8NG76 320 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR2AP1Q8NGE2 309 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR10A7Q8NGE5 316 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR8J2Q8NGG1 315 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR1S2Q8NGQ3 325 aa1.31□□□□□ -2.2
RNU1-78P-201ENST00000391248 OR13C9Q8NGT0 318 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms