RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 RANGRFQ9HD47 186 aaPredicted RBP13.71□□□□□ -0.22
SCFD2-201ENST00000388940 A8MV72 311 aaPredicted RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 GATBO75879 557 aaKnown RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 CLPSP04118 112 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 RAB3BP20337 219 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 RCVRNP35243 200 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 OR10A3P58181 314 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 PRPS1P60891 318 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 RPS4XP62701 263 aaKnown RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 SIRPAP78324 504 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 IL10RAQ13651 578 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 COL19A1Q14993 1142 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 CDK10Q15131 360 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ELOCQ15369 112 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 RPL22L1Q6P5R6 122 aaKnown RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 NOXA1Q86UR1 476 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 LIX1LQ8IVB5 337 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 LRRC17Q8N6Y2 441 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 SAMD12Q8N8I0 201 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ZSCAN1Q8NBB4 408 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 UBASH3BQ8TF42 649 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 LIPHQ8WWY8 451 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 PELI1Q96FA3 418 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 MRPL48Q96GC5 212 aaKnown RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 DMRTB1Q96MA1 342 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 THAP7Q9BT49 309 aaPredicted RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 CHRNA10Q9GZZ6 450 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 NLKQ9UBE8 527 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 SLCO1B1Q9Y6L6 691 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 FITM1A5D6W6 292 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ANKRD61A6NGH8 418 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 H0YIG0 161 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ORC5O43913 435 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 YES1P07947 543 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 MAOAP21397 527 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 MRPS15P82914 257 aaKnown RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 HSF2Q03933 536 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 NDUFAF6Q330K2 333 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 TP53I3Q53FA7 332 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 TCTE1Q5JU00 501 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 FNDC7Q5VTL7 733 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ZNF57Q68EA5 555 aaPredicted RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 PYHIN1Q6K0P9 492 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 Q6ZS52 159 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 SYT13Q7L8C5 426 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 LILRB4Q8NHJ6 448 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 THAP4Q8WY91 577 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 TRIM63Q969Q1 353 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 RFT1Q96AA3 541 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 CREB3L1Q96BA8 519 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 UPRTQ96BW1 309 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 MMABQ96EY8 250 aaPredicted RBP13.7□□□□□ -0.22
SCFD2-201ENST00000388940 MED30Q96HR3 178 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ABRACLQ9P1F3 81 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ALG5Q9Y673 324 aa13.7□□□□□ -0.22
SCFD2-201ENST00000388940 ARL6IP5O75915 188 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 TCEA1P23193 301 aaKnown RBP13.69□□□□□ -0.22
SCFD2-201ENST00000388940 SLC6A1P30531 599 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 RPL4P36578 427 aaKnown RBP13.69□□□□□ -0.22
SCFD2-201ENST00000388940 PGDP52209 483 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 HCCSP53701 268 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 BTG1P62324 171 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 UNQ9370/PRO34162Q6UXP9 181 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 GLCCI1Q86VQ1 547 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 RFLNBQ8N5W9 214 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 SPERTQ8NA61 448 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 OR51Q1Q8NH59 317 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 TRMT10AQ8TBZ6 339 aaKnown RBP13.69□□□□□ -0.22
SCFD2-201ENST00000388940 PHYHIPQ92561 330 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 WACQ9BTA9 647 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 TRAF4Q9BUZ4 470 aaPredicted RBP13.69□□□□□ -0.22
SCFD2-201ENST00000388940 HDHD2Q9H0R4 259 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 CHRDQ9H2X0 955 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 CLCA3PQ9Y6N3 262 aa13.69□□□□□ -0.22
SCFD2-201ENST00000388940 CHURC1-FNTBB4DL54 471 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 GNB5O14775 395 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 HYAL3O43820 417 aaPredicted RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 FZD7O75084 574 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 UCHL1P09936 223 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 PNMTP11086 282 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 NME1P15531 152 aaKnown RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 AHCYP23526 432 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 FNTBP49356 437 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 GDI2P50395 445 aaKnown RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 NNATQ16517 81 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 SLC25A35Q3KQZ1 300 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 WBP2NLQ6ICG8 309 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 MED25Q71SY5 747 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 OVCH1Q7RTY7 1134 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 C17orf82Q86X59 251 aaPredicted RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 GKN2Q86XP6 184 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 FYTTD1Q96QD9 318 aaKnown RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 EXOSC3Q9NQT5 275 aaKnown RBP13.68□□□□□ -0.22
SCFD2-201ENST00000388940 ADAM18Q9Y3Q7 739 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 SPTBP11277 2137 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 A0A1W2PRG6 482 aa13.68□□□□□ -0.22
SCFD2-201ENST00000388940 OR2W5A6NFC9 320 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms