RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MAPK11Q15759 364 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 DEFB134Q4QY38 66 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 EPC2Q52LR7 807 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ODF2Q5BJF6 829 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 LRRC73Q5JTD7 316 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 C11orf63Q6NUN7 778 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MFSD12Q6NUT3 480 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 CDC73Q6P1J9 531 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SARM1Q6SZW1 724 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 Q6ZVQ6 151 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 HIST3H2AQ7L7L0 130 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ARCQ7LC44 396 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 WDR49Q8IV35 697 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 RNF168Q8IYW5 571 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 CCAR2Q8N163 923 aaKnown RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 C17orf78Q8N4C9 275 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 DEFB125Q8N687 156 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MOSPD2Q8NHP6 518 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 GTF3C6Q969F1 213 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 DGCR14Q96DF8 476 aaKnown RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 TM4SF19Q96DZ7 209 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 THOC1Q96FV9 657 aaKnown RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MAELQ96JY0 434 aaKnown RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 RNF157Q96PX1 679 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 BTBD9Q96Q07 612 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 OR6C1Q96RD1 312 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SEPT5Q99719 369 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 CENPOQ9BU64 300 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SPZ1Q9BXG8 430 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 UPF3BQ9BZI7 483 aaKnown RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 TTYH1Q9H313 450 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 ZNF665Q9H7R5 613 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 NT5DC2Q9H857 520 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 NMUR1Q9HB89 426 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 MTCH1Q9NZJ7 389 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 NFKBIL1Q9UBC1 381 aaPredicted RBP-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 POLKQ9UBT6 870 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 HSPB8Q9UJY1 196 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 C15orf41Q9Y2V0 281 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 DHRS7Q9Y394 339 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 TMED3Q9Y3Q3 217 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 SLIT1O75093 1534 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 REREQ9P2R6 1566 aa-1.52□□□□□ -2.65
RNU6-540P-201ENST00000384622 A0A1B0GUH1 482 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 hCG_1642624A0A1W2PR95 340 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 A8MUA0 341 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 A8MUN3 132 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 E9PSI1 815 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CACNB4O00305 520 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 PIRO00625 290 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 AP3D1O14617 1153 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TTI1O43156 1089 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 AP5Z1O43299 807 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 ERI3O43414 337 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SSX4O60224 188 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SLC19A2O60779 497 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 RSL1D1O76021 490 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CDK14O94921 469 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SOX14O95416 240 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 C1QAP02745 245 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CATP04040 527 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 RLN2P04090 185 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 INSRP06213 1382 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 FHP07954 510 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 FCGR3AP08637 254 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TFPTP0C1Z6 253 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 OR4A8P0C604 315 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 LINC00869P0C866 280 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TLX1NBP0CAT3 122 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 RD3LP0DJH9 198 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SMIM18P0DKX4 95 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 GABRG2P18507 467 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 OMGP23515 440 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CD1CP29017 333 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 BRS3P32247 399 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MAN1A1P33908 653 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CTNNB1P35222 781 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TCF7P36402 384 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CAMLGP49069 296 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 TDGF1P3P51864 188 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 UCP2P55851 309 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 PSMC6P62333 389 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 PRLHP81277 87 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MELKQ14680 651 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MEF2DQ14814 521 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 GSTA3Q16772 222 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 H1FX-AS1Q4G0G2 97 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 PAGE3Q5JUK9 113 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 WDR45BQ5MNZ6 344 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 ODR4Q5SWX8 454 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 MRPL2Q5T653 305 aaKnown RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 FAM219BQ5XKK7 198 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SULT6B1Q6IMI4 303 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 LCN12Q6JVE5 192 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CDC42EP5Q6NZY7 148 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 SPINT4Q6UDR6 99 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 C10orf71Q711Q0 1435 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 NLRP9Q7RTR0 991 aa-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CENPVQ7Z7K6 275 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-540P-201ENST00000384622 CEP57L1Q8IYX8 460 aa-1.53□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms