RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 MED12Q93074 2177 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 A0A087WV48 116 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 A0A0G2JPF8 293 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 IDSB3KWA1 339 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 HNRNPCL3B7ZW38 293 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 C1QTNF3-AMACRE9PGA6 284 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 EIF3GO75821 320 aaKnown RBP eCLIP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 RPP14O95059 124 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 SPDEFO95238 335 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 HNRNPCL4P0DMR1 293 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 PITPNBP48739 271 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 FAM74A1Q5RGS3 127 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 AADACL4Q5VUY2 407 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 OR5M10Q6IEU7 315 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 CBLN2Q8IUK8 224 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 GATSQ8NAP1 163 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 OR6K6Q8NGW6 343 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 OR5J2Q8NH18 312 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 OSTF1Q92882 214 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 LRIG1Q96JA1 1093 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 HHIPL1Q96JK4 782 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 CRB3Q9BUF7 120 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 PINK1Q9BXM7 581 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 SEMA4CQ9C0C4 833 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ARL6Q9H0F7 186 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 GSN-AS1Q9NRJ2 163 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 MGAT4CQ9UBM8 478 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 AP1M2Q9Y6Q5 423 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 SPAG17Q6Q759 2223 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 TUBAL3A6NHL2 446 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 D6RAR5 112 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 PRR23D1E9PI22 279 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ZGLP1P0C6A0 271 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 RD3LP0DJH9 198 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 PRR23D2P0DMB1 279 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 NFYAP23511 347 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ACSL1P33121 698 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 HLXQ14774 488 aaPredicted RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 DEFB110Q30KQ9 67 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 EOGTQ5NDL2 527 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ELP2Q6IA86 826 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF836Q6ZNA1 936 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ZNF620Q6ZNG0 422 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 ZAR1Q86SH2 424 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 OR2L3Q8NG85 312 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 CD180Q99467 661 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 EPHX3Q9H6B9 360 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 BABAM2Q9NXR7 383 aa11.51□□□□□ -0.57
PRPF40B-202ENST00000380281 TSPAN11A1L157 253 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 H0YC42 278 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 DRD3P35462 400 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 RPS27P42677 84 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 PAN3Q58A45 887 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 HES5Q5TA89 166 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC48A1Q6P1K1 146 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 NHLRC1Q6VVB1 395 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 PDZD9Q8IXQ8 264 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 OR2L5Q8NG80 312 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 ADAMTS14Q8WXS8 1223 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 GHSRQ92847 366 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 TNFRSF13CQ96RJ3 184 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 OR10A4Q9H209 315 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 AUNIPQ9H7T9 357 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 PELI2Q9HAT8 420 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 FGF20Q9NP95 211 aaPredicted RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 SIDT1Q9NXL6 827 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC6A5Q9Y345 797 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 MRPS2Q9Y399 296 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 KIAA1671Q9BY89 1806 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 A0A1W2PQU0 124 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 CDHR4A6H8M9 788 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 POM121BA6NF01 834 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 TTLL8A6PVC2 850 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 GPR31O00270 319 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 STK25O00506 426 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 SLC19A2O60779 497 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 IGF2P01344 180 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 WNT1P04628 370 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 F3P13726 295 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 VEGFCP49767 419 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 ANXA11P50995 505 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 AKR1C2P52895 323 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 LGALS3BPQ08380 585 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 POMZP3Q6PJE2 187 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 COX18Q8N8Q8 333 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 OR56A1Q8NGH5 318 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 MENTQ9BUN1 341 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 CYSLTR2Q9NS75 346 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 NTMQ9P121 344 aa11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
PRPF40B-202ENST00000380281 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
PRPF40B-202ENST00000380281 GXYLT2A0PJZ3 443 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms