RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ZNF283Q8N7M2 679 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 B3GALNT2Q8NCR0 500 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 OR4L1Q8NH43 312 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 SPPL3Q8TCT6 385 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 RSC1A1Q92681 617 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ATG4CQ96DT6 458 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 FCRL4Q96PJ5 515 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 H2AFY2Q9P0M6 372 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 LOC730098B7Z3J9 87 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 HSBP1L1C9JCN9 74 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 FGF16O43320 207 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 SMPD2O60906 423 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 MBPP02686 304 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ST6GAL1P15907 406 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 HOXB9P17482 250 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 SDC1P18827 310 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ARL2P36404 184 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 AQP2P41181 271 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 MECP2P51608 486 aaKnown RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 GAGE1Q13065 139 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ENPP2Q13822 863 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 BATFQ16520 125 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 EOGTQ5NDL2 527 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 NCR3LG1Q68D85 454 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ACOT7LQ6ZUV0 252 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 MEX3DQ86XN8 651 aaKnown RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ZBTB8OSQ8IWT0 167 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 MAML2Q8IZL2 1156 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 LRRC52Q8N7C0 313 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ZNF610Q8N9Z0 462 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 OR14K1Q8NGZ2 314 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 SP7Q8TDD2 431 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 CD300LFQ8TDQ1 290 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 DTD2Q96FN9 168 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 PTCHD1Q96NR3 888 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 CACFD1Q9UGQ2 172 aa7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 ZNF223Q9UK11 482 aaPredicted RBP7.88□□□□□ -1.15
NHLRC3-201ENST00000379599 TNRC6CQ9HCJ0 1690 aaKnown RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 A0A0B4J2A0 478 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 TMEM272A0A1B0GTI8 110 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 A0A1W2PPQ1 181 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CPED1A4D0V7 1026 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 C9JQL5 133 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 PRODHO43272 600 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CLDN11O75508 207 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 ATP1B1P05026 303 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 PRPS2P11908 318 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 TTPAP49638 278 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SULT1A1P50225 295 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 HNF4GQ14541 408 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 RGNQ15493 299 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 GGNBP1Q5YKI7 109 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SLC25A24Q6NUK1 477 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 TRIM40Q6P9F5 258 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SMARCD3Q6STE5 483 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 WDR88Q6ZMY6 472 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 PRICKLE2Q7Z3G6 844 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 C5orf24Q7Z6I8 188 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SEMA6DQ8NFY4 1073 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 OR4C6Q8NH72 309 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 BRIX1Q8TDN6 353 aaKnown RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 EXTL1Q92935 676 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 KIRREL1Q96J84 757 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 NPY6RQ99463 290 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 TEX101Q9BY14 249 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 GAL3ST2Q9H3Q3 398 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 FGF20Q9NP95 211 aaPredicted RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 ADARB2Q9NS39 739 aaKnown RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SHPKQ9UHJ6 478 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SYNDIG1LA6NDD5 238 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 ITGB1BP1O14713 200 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 MAGEB4O15481 346 aaPredicted RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 GSTZ1O43708 216 aaPredicted RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 KLK8O60259 260 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CH25HO95992 272 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 BCHEP06276 602 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CD79AP11912 226 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 TPT1P13693 172 aaKnown RBP7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 ATF1P18846 271 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 PCGF2P35227 344 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CASRP41180 1078 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 GIPRP48546 466 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CAV2P51636 162 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CDH11P55287 796 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SKP1P63208 163 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 RING1Q06587 406 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SCARB2Q14108 478 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 ZDHHC20Q5W0Z9 365 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 SLC36A4Q6YBV0 504 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 PXKQ7Z7A4 578 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 OR52N2Q8NGI0 321 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 OR9A1PQ8NGU1 263 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 TERB2Q8NHR7 220 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 C1orf216Q8TAB5 229 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 XAGE5Q8WWM1 108 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 CMTM7Q96FZ5 175 aa7.87□□□□□ -1.15
NHLRC3-201ENST00000379599 GPR20Q99678 358 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms