RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TNFSF8P32971 234 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 CD79BP40259 229 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 GRK6P43250 576 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 PSMD7P51665 324 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 RPS4XP62701 263 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 FABP5Q01469 135 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 CRMP1Q14194 572 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 GGTLC2Q14390 218 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SLC35D3Q5M8T2 416 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SNAP47Q5SQN1 464 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF362Q5T0B9 420 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 AGAP7PQ5VUJ5 663 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TCEAL6Q6IPX3 200 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SLC29A4Q7RTT9 530 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ATG4DQ86TL0 474 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SLC22A16Q86VW1 577 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ARIH2OSQ8N7S6 290 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 Q8N9G6 341 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 KDF1Q8NAX2 398 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SETD6Q8TBK2 473 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 PHOSPHO1Q8TCT1 267 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TCEAL3Q969E4 200 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 CCDC74AQ96AQ1 378 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 KIAA1143Q96AT1 154 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ERMAPQ96PL5 475 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 DPYSL5Q9BPU6 564 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TGIF2Q9GZN2 237 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 MED20Q9H944 212 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ADGRL4Q9HBW9 690 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 FGF21Q9NSA1 209 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 DHCR7Q9UBM7 475 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ABCA7Q8IZY2 2146 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 A8MUA0 341 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 GABRPO00591 440 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 IMPA2O14732 288 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 RGS5O15539 181 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 RNF13O43567 381 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 RGS9O75916 674 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 LALBAP00709 142 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 CELP19835 753 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 F8A1P23610 371 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 IL12BP29460 328 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 RANBP1P43487 201 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 PNLIPRP2P54317 469 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ACTA2P62736 377 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 PPP3R1P63098 170 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ACTG2P63267 376 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 HNRNPA0Q13151 305 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 IL10RAQ13651 578 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 EBPQ15125 230 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SHBQ15464 509 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 NR0B2Q15466 257 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 NDUFAF6Q330K2 333 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 DDI2Q5TDH0 399 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 STEAP3Q658P3 488 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 RHBDD2Q6NTF9 364 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 MARCH9Q86YJ5 346 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 KLBQ86Z14 1044 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TMEM99Q8N816 258 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 FAM181AQ8N9Y4 354 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 FAM98AQ8NCA5 519 aaKnown RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 OR10H4Q8NGA5 316 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 OR5M3Q8NGP4 307 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 OR1N1Q8NGS0 311 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 SMPDL3BQ92485 455 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TMEM203Q969S6 136 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TMCO6Q96DC7 493 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 NUDT9Q9BW91 350 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 HCAR1Q9BXC0 346 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 OR51V1Q9H2C8 321 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 NRIP3Q9NQ35 241 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 QPCTLQ9NXS2 382 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 PLEKHB1Q9UF11 243 aaPredicted RBP9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF229Q9UJW7 825 aa9.58□□□□□ -0.88
POLR2J3-201ENST00000379340 TNRC6BQ9UPQ9 1833 aaKnown RBP9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 A0A1B0GTQ1 180 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 MCIDASD6RGH6 385 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 CASKO14936 926 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 TSPAN2O60636 221 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 REM1O75628 298 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 APOA1P02647 267 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 PTBP1P26599 531 aaKnown RBP eCLIP9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 SDC2P34741 201 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 RPL4P36578 427 aaKnown RBP9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 SLC16A1P53985 500 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 MXD1Q05195 221 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 FOXC1Q12948 553 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 NSDHLQ15738 373 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 CD226Q15762 336 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 PMS2CLQ68D20 193 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 MZT2AQ6P582 158 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 KANSL1Q7Z3B3 1105 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 SYS1Q8N2H4 156 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 ZNF321PQ8N8H1 164 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 POC5Q8NA72 575 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 OR52E2Q8NGJ4 325 aa9.57□□□□□ -0.88
POLR2J3-201ENST00000379340 SNRNP27Q8WVK2 155 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms