RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 DYDC1Q8WWB3 177 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 MUCL1Q96DR8 90 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 SPDL1Q96EA4 605 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 CXorf56Q9H5V9 222 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 ARMC7Q9H6L4 198 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 CACYBPQ9HB71 228 aaKnown RBP19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 SLC52A3Q9NQ40 469 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 ZNF701Q9NV72 531 aaPredicted RBP19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 SLC25A37Q9NYZ2 338 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 MALT1Q9UDY8 824 aa19.15■□□□□ 0.66
CCDC28B-201ENST00000373602 OR5H1A6NKK0 313 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 PRG2P13727 222 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 IDUAP35475 653 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 CADM2Q8N3J6 435 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 BBS10Q8TAM1 723 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 MAL2Q969L2 176 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 Q96MF0 132 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 TMEM45AQ9NWC5 275 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 ASB6Q9NWX5 421 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 CCDC167Q9P0B6 97 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 SLAMF8Q9P0V8 285 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 SLC9A8Q9Y2E8 581 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 FLVCR1Q9Y5Y0 555 aa19.14■□□□□ 0.65
CCDC28B-201ENST00000373602 LIPT2A6NK58 231 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 GPIP06744 558 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 ADSLP30566 484 aaPredicted RBP19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 CEACAM7Q14002 265 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 SLC17A1Q14916 467 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 ZNF311Q5JNZ3 666 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 SERPINA11Q86U17 422 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 SLC35B4Q969S0 331 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 FBXW5Q969U6 566 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 POM121Q96HA1 1249 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 COX4I2Q96KJ9 171 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 SMR3AQ99954 134 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 INTS9Q9NV88 658 aaKnown RBP19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 PARPBPQ9NWS1 579 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 TAS2R16Q9NYV7 291 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 LAMP3Q9UQV4 416 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 GMEB1Q9Y692 573 aa19.13■□□□□ 0.65
CCDC28B-201ENST00000373602 A8MVM7 634 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 HMGB1P1B2RPK0 211 aaPredicted RBP19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 NR5A2O00482 541 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 RAD51DO75771 328 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 DANCRP0C864 163 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 NCF2P19878 526 aaPredicted RBP19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 ATP4BP51164 291 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 IRX1P78414 480 aaPredicted RBP19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 BNIP2Q12982 314 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 OR7A5Q15622 319 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 ZNF672Q499Z4 452 aaPredicted RBP19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 PAGE3Q5JUK9 113 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 OTUD3Q5T2D3 398 aaPredicted RBP19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 CASP12Q6UXS9 341 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 HDXQ7Z353 690 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 TMEM99Q8N816 258 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 KBTBD8Q8NFY9 601 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 NEUROG1Q92886 237 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 C3orf49Q96BT1 292 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 BDH2Q9BUT1 245 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 TRIM2Q9C040 744 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 NPAP1Q9NZP6 1156 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 VPS13CQ709C8 3753 aa19.12■□□□□ 0.65
CCDC28B-201ENST00000373602 USF3Q68DE3 2245 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 TRBV5-3A0A0A0MS03 114 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 CIB4A0PJX0 185 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 CCT8L1PA6NM43 557 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 C5orf58C9J3I9 102 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 PDLIM1O00151 329 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 AKR7A3O95154 331 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 ARAFP10398 606 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 ETS2P15036 469 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 HOXB4P17483 251 aaPredicted RBP19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 PPIBP23284 216 aaKnown RBP19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 FOXG1P55316 489 aaPredicted RBP19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 RPS4XP62701 263 aaKnown RBP19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 FAPQ12884 760 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 SQLEQ14534 574 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 KRTAP21-3Q3LHN1 58 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 C10orf111Q8N326 155 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 CIARTQ8N365 385 aaPredicted RBP19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 STON2Q8WXE9 905 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 TMEM45BQ96B21 275 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 MUS81Q96NY9 551 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 SF3B5Q9BWJ5 86 aaKnown RBP19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 PIF1Q9H611 641 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 VIPAS39Q9H9C1 493 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 VAPAQ9P0L0 249 aa19.11■□□□□ 0.65
CCDC28B-201ENST00000373602 CADP27708 2225 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 AQP7P3A6NL99 342 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 TMEM229AB2RXF0 380 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 H7C1Q1 480 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 FRS3O43559 492 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 NPIPB7O75200 414 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 SOD3P08294 240 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 ITGA5P08648 1049 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 GABRA6Q16445 453 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 AGKQ53H12 422 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 GCNT6Q5T4J0 391 aa19.1■□□□□ 0.65
CCDC28B-201ENST00000373602 OR7E24Q6IFN5 339 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms