RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 MFSD13AQ14CX5 517 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 C1orf140Q5VVS0 124 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 TTC33Q6PID6 262 aaPredicted RBP12.33□□□□□ -0.44
SSR4-202ENST00000370085 CCDC121Q6ZUS5 278 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 SEM1Q6ZVN7 128 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 NCCRP1Q6ZVX7 275 aaPredicted RBP12.33□□□□□ -0.44
SSR4-202ENST00000370085 DHFR2Q86XF0 187 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 CCDC71Q8IV32 467 aaPredicted RBP12.33□□□□□ -0.44
SSR4-202ENST00000370085 CNEP1R1Q8N9A8 125 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 PIGXQ8TBF5 258 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 HSH2DQ96JZ2 352 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 ARL5BQ96KC2 179 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 LRGUKQ96M69 825 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 PIGMQ9H3S5 423 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 COQ10BQ9H8M1 238 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 C6orf203Q9P0P8 240 aaPredicted RBP12.33□□□□□ -0.44
SSR4-202ENST00000370085 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 KIAA1549Q9HCM3 1950 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 BAHCC1Q9P281 2608 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 TRAV36DV7A0A075B6V5 113 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 EBAG9O00559 213 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 DNAJC8O75937 253 aaPredicted RBP12.32□□□□□ -0.44
SSR4-202ENST00000370085 MSX2P35548 267 aaPredicted RBP12.32□□□□□ -0.44
SSR4-202ENST00000370085 CDH12P55289 794 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 ST3GAL3Q11203 375 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 NPTX1Q15818 432 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 FAM69AQ5T7M9 428 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 VTCN1Q7Z7D3 282 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 RBM45Q8IUH3 476 aaKnown RBP12.32□□□□□ -0.44
SSR4-202ENST00000370085 GCNT2Q8N0V5 402 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 MFSD8Q8NHS3 518 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 RNF128Q8TEB7 428 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 ROBO4Q8WZ75 1007 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 ASB9Q96DX5 294 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 SLC41A3Q96GZ6 507 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 PYURFQ96I23 114 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 PRRC1Q96M27 445 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 HS6ST2Q96MM7 605 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 TMEM43Q9BTV4 400 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 RSPO3Q9BXY4 272 aaPredicted RBP12.32□□□□□ -0.44
SSR4-202ENST00000370085 SRXN1Q9BYN0 137 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 KLHL4Q9C0H6 718 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 CHST11Q9NPF2 352 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 FANCFQ9NPI8 374 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 EMC3Q9P0I2 261 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 SLC7A7Q9UM01 511 aa12.32□□□□□ -0.44
SSR4-202ENST00000370085 KLF2Q9Y5W3 355 aaPredicted RBP12.32□□□□□ -0.44
SSR4-202ENST00000370085 USP9YO00507 2555 aaPredicted RBP12.32□□□□□ -0.44
SSR4-202ENST00000370085 CACNA1CQ13936 2221 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 KDM4EB2RXH2 506 aaPredicted RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 GPR171O14626 319 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 TPST2O60704 377 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 AQP8O94778 261 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 TOXO94900 526 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 TNFRSF1BP20333 461 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 FPR1P21462 350 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 RBM34P42696 430 aaKnown RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 AGFG1P52594 562 aaKnown RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 RASGEF1BQ0VAM2 473 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 TRAP1Q12931 704 aaKnown RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 OR7A5Q15622 319 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 PAQR6Q6TCH4 344 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 FAM214BQ7L5A3 538 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 C10orf53Q8N6V4 93 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 OR4D11Q8NGI4 311 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 OR6S1Q8NH40 331 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 CCDC124Q96CT7 223 aaKnown RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 WFDC6Q9BQY6 131 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 FNDC11Q9BVV2 318 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 MMADHCQ9H3L0 296 aaPredicted RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 RIMS3Q9UJD0 308 aa12.31□□□□□ -0.44
SSR4-202ENST00000370085 FOXD3Q9UJU5 478 aaPredicted RBP12.31□□□□□ -0.44
SSR4-202ENST00000370085 ZC3H12DA2A288 527 aaKnown RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 HTR3EA5X5Y0 456 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 LIPT2A6NK58 231 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 FAM90A27PA6NNH2 459 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 EEF1E1-BLOC1S5C9J1V9 151 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 EEF1E1O43324 174 aaKnown RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 CYTIPO60759 359 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 SS18L1O75177 396 aaPredicted RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 NPIPB7O75200 414 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 PDE5AO76074 875 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 VAMP5O95183 116 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 YES1P07947 543 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 RPS5P46782 204 aaKnown RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 ASCL1P50553 236 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 PIN1Q13526 163 aaPredicted RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 PDK3Q15120 406 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 OTUD3Q5T2D3 398 aaPredicted RBP12.3□□□□□ -0.44
SSR4-202ENST00000370085 TMEM225Q6GV28 225 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 LCN8Q6JVE9 175 aa12.3□□□□□ -0.44
SSR4-202ENST00000370085 RRM2BQ7LG56 351 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms