RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 SMU1Q2TAY7 513 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SPANXN4Q5MJ08 99 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 ANXA8L1Q5VT79 327 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 ZNF544Q6NX49 715 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 ANKFN1Q8N957 763 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 WDR31Q8NA23 367 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 OIT3Q8WWZ8 545 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM158Q8WZ71 300 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 FAM168AQ92567 244 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 CNOT9Q92600 299 aaKnown RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 DDIT4LQ96D03 193 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 MUS81Q96NY9 551 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 ZIM3Q96PE6 472 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 NAA11Q9BSU3 229 aaPredicted RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SAP130Q9H0E3 1048 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 BRD7Q9NPI1 651 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 EXOSC3Q9NQT5 275 aaKnown RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SLC17A5Q9NRA2 495 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SLC7A10Q9NS82 523 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SLC9A8Q9Y2E8 581 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 AMDHD2Q9Y303 409 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 TMED7Q9Y3B3 224 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 HIVEP2P31629 2446 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 NUP214P35658 2090 aaPredicted RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 PRAMEF27A3QJZ7 478 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ELOA3DA6NLF2 546 aaPredicted RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ATP6V1G2-DDX39BF2Z307 99 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 H7C417 338 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 PHF1O43189 567 aaPredicted RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 TYROBPO43914 113 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 LY6HO94772 140 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 SERPINE1P05121 402 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 GUSBP08236 651 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 MYZAPP0CAP1 466 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 FAM157CP0CG43 387 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 CDH2P19022 906 aaPredicted RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 FKBP2P26885 142 aaKnown RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 TACR3P29371 465 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 HTR3AP46098 478 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 GSK3AP49840 483 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 POLR2HP52434 150 aaKnown RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 NME5P56597 212 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ABCE1P61221 599 aaKnown RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 VSNL1P62760 191 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 SLC35A1P78382 337 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 VLDLRP98155 873 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 CHRNB3Q05901 458 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 CASP8Q14790 479 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 SYPL1Q16563 259 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ELOA3BQ3SY89 546 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 OTUD3Q5T2D3 398 aaPredicted RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 TSPO2Q5TGU0 170 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 CYB5R2Q6BCY4 276 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 RNF130Q86XS8 419 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 C17orf78Q8N4C9 275 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ELOA3Q8NG57 546 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 C10orf105Q8TEF2 133 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 WDR60Q8WVS4 1066 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 TESCQ96BS2 214 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 NEURL3Q96EH8 262 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 BEX2Q9BXY8 128 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 FKRPQ9H9S5 495 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
CLRN3-201ENST00000368671 PARPBPQ9NWS1 579 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 DCTN4Q9UJW0 460 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 OSGIN1Q9UJX0 560 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 CDC42EP3Q9UKI2 254 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 TRAPPC4Q9Y296 219 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 RAP2CQ9Y3L5 183 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 FLVCR1Q9Y5Y0 555 aa9.06□□□□□ -0.96
CLRN3-201ENST00000368671 ZC3H12DA2A288 527 aaKnown RBP9.05□□□□□ -0.96
CLRN3-201ENST00000368671 E9PBE3 544 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 PDLIM1O00151 329 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 HMGN4O00479 90 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 ZNF208O43345 1280 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 EIF1BO60739 113 aaKnown RBP9.05□□□□□ -0.96
CLRN3-201ENST00000368671 CHRM4P08173 479 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 IGHV4-31P0DP07 118 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 LBPP18428 481 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 APOBEC3AP31941 199 aaPredicted RBP9.05□□□□□ -0.96
CLRN3-201ENST00000368671 S100A3P33764 101 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 SLC1A6P48664 564 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 EFNA4P52798 201 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 CLNS1AP54105 237 aaKnown RBP9.05□□□□□ -0.96
CLRN3-201ENST00000368671 PRPS1P60891 318 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 H3F3AP84243 136 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 SLC17A1Q14916 467 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 OR7A5Q15622 319 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 FAM174BQ3ZCQ3 159 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 KLHL24Q6TFL4 600 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 AAED1Q7RTV5 226 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 C1orf162Q8NEQ5 155 aaPredicted RBP9.05□□□□□ -0.96
CLRN3-201ENST00000368671 PNPT1Q8TCS8 783 aaKnown RBP9.05□□□□□ -0.96
CLRN3-201ENST00000368671 PMM1Q92871 262 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 FBXO17Q96EF6 278 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 PANX1Q96RD7 426 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 NUF2Q9BZD4 464 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 AMBRA1Q9C0C7 1298 aa9.05□□□□□ -0.96
CLRN3-201ENST00000368671 C20orf27Q9GZN8 174 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms