RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 AIF1P55008 147 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 CSNK1G2P78368 415 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 KLRC3Q07444 240 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF763Q0D2J5 394 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 KLRB1Q12918 225 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 GANABQ14697 944 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 IL17AQ16552 155 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 CCDC14Q49A88 953 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 SFT2D3Q587I9 215 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 CARD16Q5EG05 197 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 C1orf220Q5T0J3 134 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 BEND3Q5T5X7 828 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 CENPPQ6IPU0 288 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ARCQ7LC44 396 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 PRSS41Q7RTY9 318 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 VRK2Q86Y07 508 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF679Q8IYX0 411 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 KIR2DL5AQ8N109 375 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF740Q8NDX6 193 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 OR4K14Q8NGD5 310 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 OR52H1Q8NGJ2 320 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 KIR2DL5BQ8NHK3 375 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 OR1E3Q8WZA6 343 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ST8SIA1Q92185 356 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 MRPS31Q92665 395 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 SLC41A3Q96GZ6 507 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 TIMD4Q96H15 378 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 RNF2Q99496 336 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 SDHCQ99643 169 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 TSG101Q99816 390 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 RNF167Q9H6Y7 350 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 NANOGQ9H9S0 305 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 POLE4Q9NR33 117 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 DCDC2Q9UHG0 476 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 PRPF19Q9UMS4 504 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 MEGF6O75095 1541 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 A6NIZ1 184 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 CXCL11O14625 94 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 HCRTR1O43613 425 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 HPNP05981 417 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 NR2C1P13056 603 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 POU2F1P14859 743 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 COX5AP20674 150 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 CD1BP29016 333 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 SHMT2P34897 504 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 GRIA1P42261 906 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 MAGEA8P43361 318 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 GSSP48637 474 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 CCT3P49368 545 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 HNRNPA3P51991 378 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF133P52736 654 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 RAP1BP61224 184 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 TGFBR3Q03167 851 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 CKAP4Q07065 602 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 FGL1Q08830 312 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 PSG7Q13046 419 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 PLD1Q13393 1074 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 NLRP9Q7RTR0 991 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 RDH10Q8IZV5 341 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 EIF1ADQ8N9N8 165 aaKnown RBP2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 C20orf203Q8NBC4 194 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 OR2AP1Q8NGE2 309 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 FBXO30Q8TB52 745 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 SCFD1Q8WVM8 642 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 EBF4Q9BQW3 602 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 TUBGCP2Q9BSJ2 902 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 RBKSQ9H477 322 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 YY1AP1Q9H869 796 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 NUDT15Q9NV35 164 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 TREM2Q9NZC2 230 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 ADAM28Q9UKQ2 775 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 CDH9Q9ULB4 789 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 NAP1L2Q9ULW6 460 aaPredicted RBP2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 SCN2AQ99250 2005 aa2.32□□□□□ -2.04
ECHDC1-201ENST00000368287 LTBP1Q14766 1721 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 IGHV1OR21-1A0A087WYE8 117 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 TCRBV9S1A1TA0A576 114 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 PINLYPA6NC86 204 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 ABCD4O14678 606 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 RHOBTB1O94844 696 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 AP2A1O95782 977 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 KRT6AP02538 564 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 CXCR2P25025 360 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 GNA11P29992 359 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 CALCRP30988 508 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 YWHABP31946 246 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 UGT1A5P35504 534 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 DUSP3P51452 185 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 PLK1P53350 603 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 ATP1B3P54709 279 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 CDK16Q00536 496 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 TLE4Q04727 773 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 DAZ2Q13117 558 aaKnown RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 EIF4EBP2Q13542 120 aaPredicted RBP2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 MESDQ14696 234 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 PDK3Q15120 406 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 DUSP7Q16829 419 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 EXOC3L2Q2M3D2 409 aa2.31□□□□□ -2.04
ECHDC1-201ENST00000368287 OR52E8Q6IFG1 317 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms