RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RPS4XP62701 263 aaKnown RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 FHL1Q13642 323 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 NNATQ16517 81 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.83□□□□□ -0.36
USF1-202ENST00000368020 FAM131AQ6UXB0 335 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 CADM3Q8N126 398 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 MS4A15Q8N5U1 240 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 TMEM99Q8N816 258 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 OR2T27Q8NH04 317 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 OR5W2Q8NH69 310 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 HAVCR2Q8TDQ0 301 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 SMPDL3BQ92485 455 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 DIRAS2Q96HU8 199 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 SRRQ9GZT4 340 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 LAT2Q9GZY6 243 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 ZNF768Q9H5H4 540 aaKnown RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 MED20Q9H944 212 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 YARS2Q9Y2Z4 477 aaKnown RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 PCDHGB2Q9Y5G2 931 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 LAMA1P25391 3075 aa12.83□□□□□ -0.36
USF1-202ENST00000368020 RIF1Q5UIP0 2472 aaKnown RBP12.83□□□□□ -0.36
USF1-202ENST00000368020 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 IMPA2O14732 288 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 SLC19A2O60779 497 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 IL12BP29460 328 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 CD79BP40259 229 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 KCNAB1Q14722 419 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 PON3Q15166 354 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 SLC29A4Q7RTT9 530 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 SLC35F3Q8IY50 421 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 OR52E2Q8NGJ4 325 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 OR5M3Q8NGP4 307 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 OR1L3Q8NH93 324 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 PHOSPHO1Q8TCT1 267 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ZNF721Q8TF20 911 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 SDHCQ99643 169 aaPredicted RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 HCAR1Q9BXC0 346 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 OR8D2Q9GZM6 311 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 RERGLQ9H628 205 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ABCB9Q9NP78 766 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 POLE4Q9NR33 117 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 GRIP1Q9Y3R0 1128 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 WDR87Q6ZQQ6 2873 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 EIF4E2O60573 245 aaKnown RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 DDAH2O95865 285 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 CD1AP06126 327 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 MYL9P24844 172 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 OR1D4P47884 311 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 EMC4Q5J8M3 183 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ARHGAP40Q5TG30 622 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 DBX2Q6ZNG2 339 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 ATG4DQ86TL0 474 aaPredicted RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 ZFP41Q8N8Y5 198 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ZSCAN1Q8NBB4 408 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 CHAC2Q8WUX2 184 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 HTRA1Q92743 480 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ATOH1Q92858 354 aaPredicted RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 ADIPOR1Q96A54 375 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 TXNDC15Q96J42 360 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ASXL3Q9C0F0 2248 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 NXF5Q9H1B4 397 aaKnown RBP12.82□□□□□ -0.36
USF1-202ENST00000368020 FSCN3Q9NQT6 498 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 NPAP1Q9NZP6 1156 aa12.82□□□□□ -0.36
USF1-202ENST00000368020 ASCC3Q8N3C0 2202 aaKnown RBP12.81□□□□□ -0.36
USF1-202ENST00000368020 ADAMTS20P59510 1910 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 LNP1A1A4G5 178 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 TMCC2O75069 709 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 REM1O75628 298 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 HIST1H1CP16403 213 aaKnown RBP12.81□□□□□ -0.36
USF1-202ENST00000368020 NRG3P56975 720 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 NSDHLQ15738 373 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 CCDC58Q4VC31 144 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 VASNQ6EMK4 673 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 TEX19Q8NA77 164 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 C4orf36Q96KX1 117 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 ISG20L2Q9H9L3 353 aaKnown RBP12.81□□□□□ -0.36
USF1-202ENST00000368020 MOKQ9UQ07 419 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 HIF3AQ9Y2N7 669 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 IER3IP1Q9Y5U9 82 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 UNC13CQ8NB66 2214 aa12.81□□□□□ -0.36
USF1-202ENST00000368020 RP1P56715 2156 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 OR2W5A6NFC9 320 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 MCIDASD6RGH6 385 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 BOLA2-SMG1P6H3BVE0 249 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 SNPHO15079 494 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 SEC14L5O43304 696 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 CDC40O60508 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
USF1-202ENST00000368020 ANKRD34CP0C6C1 535 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 CLEC2LP0C7M8 214 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 IL7P13232 177 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 DIO1P49895 249 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 CCR4P51679 360 aa12.8□□□□□ -0.36
USF1-202ENST00000368020 GBX2P52951 348 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms