RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PRPF19Q9UMS4 504 aaKnown RBP2.79□□□□□ -1.96
RNU6-560P-201ENST00000364007 TRAF3IP3Q9Y228 551 aa2.79□□□□□ -1.96
RNU6-560P-201ENST00000364007 ASF1AQ9Y294 204 aa2.79□□□□□ -1.96
RNU6-560P-201ENST00000364007 PRG3Q9Y2Y8 225 aaPredicted RBP2.79□□□□□ -1.96
RNU6-560P-201ENST00000364007 NEUROG3Q9Y4Z2 214 aa2.79□□□□□ -1.96
RNU6-560P-201ENST00000364007 PNPLA6Q8IY17 1366 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SH3TC1Q8TE82 1336 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 IGHV1OR21-1A0A087WYE8 117 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 TRIM49D1C9J1S8 452 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 HIP1O00291 1037 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 FAM189A1O60320 539 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 ATP5LO75964 103 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 P04436 131 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SHMT2P34897 504 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 RDXP35241 583 aaKnown RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 MAP3K8P41279 467 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 RPS10P46783 165 aaKnown RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 CASP4P49662 377 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 RIPK1Q13546 671 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 MESDQ14696 234 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 GANABQ14697 944 aaKnown RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 DMRTC1Q5HYR2 192 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 C1orf100Q5SVJ3 147 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 CASC10Q5T4H9 136 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 C11orf71Q6IPW1 123 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 TMIGD1Q6UXZ0 262 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 ZNF571Q7Z3V5 609 aaPredicted RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 RALGPS2Q86X27 583 aaPredicted RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 CCDC65Q8IXS2 484 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 RDH10Q8IZV5 341 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 ZNF433Q8N7K0 673 aaPredicted RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 IPMKQ8NFU5 416 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 RLN3Q8WXF3 142 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 EFHD2Q96C19 240 aaPredicted RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 CMTM7Q96FZ5 175 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 PAGE5Q96GU1 130 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SEC22AQ96IW7 307 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 KCNA7Q96RP8 456 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 HIST1H4GQ99525 98 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 NRTNQ99748 197 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 MRPL45Q9BRJ2 306 aaKnown RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 NAT9Q9BTE0 207 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SELENOIQ9C0D9 397 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 C20orf85Q9H1P6 137 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SLC25A22Q9H936 323 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 ZNF331Q9NQX6 463 aaPredicted RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SMOXQ9NWM0 555 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 SMPD3Q9NY59 655 aaPredicted RBP2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 CACNG2Q9Y698 323 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 PIKFYVEQ9Y2I7 2098 aa2.78□□□□□ -1.96
RNU6-560P-201ENST00000364007 A0A1B0GUA9 196 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 GJE1A6NN92 205 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 E9PBE3 544 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 F5H6K3 240 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 H0YCG3 227 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 MAGEB3O15480 346 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 UGT1A9O60656 530 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 SNNO75324 88 aaPredicted RBP2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 TNFSF13O75888 250 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 KLF8O95600 359 aaPredicted RBP2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 AP2A1O95782 977 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 INSP01308 110 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 ZNF853P0CG23 659 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 PRG2P13727 222 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 CCDC130P13994 396 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 NCK1P16333 377 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 KIR2DS4P43632 304 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 KPNA2P52292 529 aaKnown RBP2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 PKNOX1P55347 436 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 KLRC3Q07444 240 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 CFAP157Q5JU67 520 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 ATAD3BQ5T9A4 648 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 TIGD3Q6B0B8 471 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 ACP7Q6ZNF0 438 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 GDPD3Q7L5L3 318 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 SLC26A11Q86WA9 606 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 OR52H1Q8NGJ2 320 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 OR51S1Q8NGJ8 323 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 MAIP1Q8WWC4 291 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 ARPC1AQ92747 370 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 FAM104AQ969W3 186 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 RNF2Q99496 336 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 RASL11BQ9BPW5 248 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 RAB34Q9BZG1 259 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 REEP4Q9H6H4 257 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 RNF167Q9H6Y7 350 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 THUMPD1Q9NXG2 353 aaKnown RBP2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 ARID1AO14497 2285 aa2.77□□□□□ -1.97
RNU6-560P-201ENST00000364007 NSG1A0A0A6YYJ2 146 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 GMFGO60234 142 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 DIRAS1O95057 198 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 MOSP00540 346 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 PSG2P11465 335 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 ZNF44P15621 663 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 RCC1P18754 421 aaPredicted RBP2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 PRDX3P30048 256 aaKnown RBP2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 BTCP35070 178 aa2.76□□□□□ -1.97
RNU6-560P-201ENST00000364007 RFC4P35249 363 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms