RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PDLIM3Q53GG5 364 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 HIST2H3PS2Q5TEC6 136 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF334Q9HCZ1 680 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 GPR45Q9Y5Y3 372 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 AIFM1O95831 613 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 ESCO2Q56NI9 601 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 PPP1R3BQ86XI6 285 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 OR4N2Q8NGD1 307 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 BOKQ9UMX3 212 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 CEPT1Q9Y6K0 416 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 BLACEA4D250 179 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 SNAPINO95295 136 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 OMGP23515 440 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 HABP2Q14520 560 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 LRRC28Q86X40 367 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MUL1Q969V5 352 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 IL37Q9NZH6 218 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 A0A0B4J2A0 478 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 IMPA2O14732 288 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 CD46P15529 392 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 HIST1H1TP22492 207 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 OR2G6Q5TZ20 316 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 NKAIN2Q5VXU1 208 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 SHEQ5VZ18 495 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 RABEPKQ7Z6M1 372 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 GRAMD2AQ8IUY3 354 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 GLTPQ9NZD2 209 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 SHPKQ9UHJ6 478 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 IGKV6-21A0A0C4DH24 114 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 RNF212BA8MTL3 300 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MGST1P10620 155 aaKnown RBP17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MSMO1Q15800 293 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MPP7Q5T2T1 576 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 UPRTQ96BW1 309 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 KIF25Q9UIL4 384 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 A0A1W2PQ09 198 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 A6NHS1 94 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TNFRSF10AO00220 468 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 GASTP01350 101 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 DEFB103AP81534 67 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 LEXMQ3ZCV2 418 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 CBLL1Q75N03 491 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 MFSD9Q8NBP5 474 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 NKX3-1Q99801 234 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 P2RX6O15547 441 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 CNMDO75829 334 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TGM6O95932 706 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 PRLHRP49683 370 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 PRAMEF20Q5VT98 475 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TMEM71Q6P5X7 295 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 ESPNLQ6ZVH7 1005 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 SLC35D2Q76EJ3 337 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF546Q86UE3 836 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 GPR160Q9UJ42 338 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 BAZ2AQ9UIF9 1905 aaKnown RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 MSTNO14793 375 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 C21orf33P30042 268 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 MRPS34P82930 218 aaKnown RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 RPE65Q16518 533 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TMEM176BQ3YBM2 270 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 C18orf63Q68DL7 685 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 SMIM15Q7Z3B0 74 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF480Q8WV37 535 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 ADAMTS14Q8WXS8 1223 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 ISG20Q96AZ6 181 aaKnown RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 SLC19A3Q9BZV2 496 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 RAB27BO00194 218 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 FZD7O75084 574 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TK1P04183 234 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 F3P13726 295 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 M6PRP20645 277 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 RAB5CP51148 216 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 RBPJQ06330 500 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 HTR3DQ70Z44 454 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 RBMXL3Q8N7X1 1067 aaKnown RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 MUCL1Q96DR8 90 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 OCSTAMPQ9BR26 566 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 HEMK1Q9Y5R4 338 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 C17orf112F2Z3M2 114 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 F10P00742 488 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 TFAP2CQ92754 450 aa17.12■□□□□ 0.33
SHANK1-202ENST00000359082 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-202ENST00000359082 K7EPK0 472 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 FADS1O60427 444 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 RNLSQ5VYX0 342 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 FAM71E2Q8N5Q1 922 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 OR4A16Q8NH70 328 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF566Q969W8 418 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 INSM2Q96T92 566 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 TREX1Q9NSU2 369 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 CNOT2Q9NZN8 540 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 NOSIPQ9Y314 301 aaKnown RBP17.11■□□□□ 0.33
SHANK1-202ENST00000359082 PLEKHM1Q9Y4G2 1056 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
SHANK1-202ENST00000359082 SCRG1O75711 98 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms