RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HHIPL1Q96JK4 782 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 ZFYVE21Q9BQ24 234 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 CPEB1Q9BZB8 566 aaKnown RBP12.02□□□□□ -0.49
SMC4-202ENST00000357388 OR52D1Q9H346 318 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 IFT22Q9H7X7 185 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 DNAJB11Q9UBS4 358 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 MOKQ9UQ07 419 aa12.02□□□□□ -0.49
SMC4-202ENST00000357388 CR2P20023 1033 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 RPS26P11Q5JNZ5 115 aaPredicted RBP12.01□□□□□ -0.49
SMC4-202ENST00000357388 LYSMD2Q8IV50 215 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 OR1S2Q8NGQ3 325 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 ST8SIA4Q92187 359 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 BPIFA2Q96DR5 249 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 SPHK1Q9NYA1 384 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 MARCH4Q9P2E8 410 aaPredicted RBP12.01□□□□□ -0.49
SMC4-202ENST00000357388 MYOTQ9UBF9 498 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 PSORS1C1Q9UIG5 152 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 ADGRB1O14514 1584 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 PRAMEF26H0Y7S4 382 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 MBP02144 154 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 HEPHL1Q6MZM0 1159 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 DBX2Q6ZNG2 339 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 TECPR1Q7Z6L1 1165 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 GPR26Q8NDV2 337 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 SDR9C7Q8NEX9 313 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 SORT1Q99523 831 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 WRAP73Q9P2S5 460 aaPredicted RBP12.01□□□□□ -0.49
SMC4-202ENST00000357388 GAB2Q9UQC2 676 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 PLSCR5A0PG75 271 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 OR2F2O95006 317 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CER1O95813 267 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 RAB11AP62491 216 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 OR2F1Q13607 317 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 TAF9Q16594 264 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 LCTLQ6UWM7 567 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 SLC7A6Q92536 515 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 NAT6Q93015 286 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 C20orf85Q9H1P6 137 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 NDRG3Q9UGV2 375 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 MROH2AA6NES4 1674 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 TNFSF12O43508 249 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 F10P00742 488 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A6P0DMU7 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A5P0DMU8 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A7P0DMV0 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A8P0DMV1 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A9P0DMV2 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 IVDP26440 423 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 F2RL1P55085 397 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 PCBD1P61457 104 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 SEC61A1P61619 476 aaKnown RBP12.01□□□□□ -0.49
SMC4-202ENST00000357388 H3F3AP84243 136 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A2Q5DJT8 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A1Q5HYN5 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 C14orf80Q86SX3 495 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 OR5L1Q8NGL2 311 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 OR5M8Q8NGP6 311 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 CT45A3Q8NHU0 189 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 ASB13Q8WXK3 278 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 AMDHD1Q96NU7 426 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 KLHL42Q9P2K6 505 aa12.01□□□□□ -0.49
SMC4-202ENST00000357388 STRAPQ9Y3F4 350 aaKnown RBP12.01□□□□□ -0.49
SMC4-202ENST00000357388 HTR6P50406 440 aa12□□□□□ -0.49
SMC4-202ENST00000357388 GPR18Q14330 331 aa12□□□□□ -0.49
SMC4-202ENST00000357388 SIX1Q15475 284 aaPredicted RBP12□□□□□ -0.49
SMC4-202ENST00000357388 LYSMD4Q5XG99 296 aa12□□□□□ -0.49
SMC4-202ENST00000357388 SSX7Q7RTT5 188 aa12□□□□□ -0.49
SMC4-202ENST00000357388 ZNF551Q7Z340 670 aaPredicted RBP12□□□□□ -0.49
SMC4-202ENST00000357388 NLGN4XQ8N0W4 816 aa12□□□□□ -0.49
SMC4-202ENST00000357388 HCAR1Q9BXC0 346 aa12□□□□□ -0.49
SMC4-202ENST00000357388 DIMT1Q9UNQ2 313 aaKnown RBP12□□□□□ -0.49
SMC4-202ENST00000357388 GPR45Q9Y5Y3 372 aa12□□□□□ -0.49
SMC4-202ENST00000357388 SNAI1O95863 264 aaPredicted RBP12□□□□□ -0.49
SMC4-202ENST00000357388 ZNF44P15621 663 aa12□□□□□ -0.49
SMC4-202ENST00000357388 TNFRSF1BP20333 461 aa12□□□□□ -0.49
SMC4-202ENST00000357388 PSMB10P40306 273 aa12□□□□□ -0.49
SMC4-202ENST00000357388 NPBWR1P48145 328 aa12□□□□□ -0.49
SMC4-202ENST00000357388 CCR9P51686 369 aa12□□□□□ -0.49
SMC4-202ENST00000357388 TSPAN31Q12999 210 aa12□□□□□ -0.49
SMC4-202ENST00000357388 RAB33AQ14088 237 aa12□□□□□ -0.49
SMC4-202ENST00000357388 ADIRFQ15847 76 aa12□□□□□ -0.49
SMC4-202ENST00000357388 GTDC1Q4AE62 458 aa12□□□□□ -0.49
SMC4-202ENST00000357388 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
SMC4-202ENST00000357388 OR52W1Q6IF63 320 aa12□□□□□ -0.49
SMC4-202ENST00000357388 SLC39A5Q6ZMH5 540 aa12□□□□□ -0.49
SMC4-202ENST00000357388 WDR88Q6ZMY6 472 aa12□□□□□ -0.49
SMC4-202ENST00000357388 OR1M1Q8NGA1 313 aa12□□□□□ -0.49
SMC4-202ENST00000357388 CDS1Q92903 461 aa12□□□□□ -0.49
SMC4-202ENST00000357388 C11orf54Q9H0W9 315 aaPredicted RBP12□□□□□ -0.49
SMC4-202ENST00000357388 YTHDF2Q9Y5A9 579 aaKnown RBP12□□□□□ -0.49
SMC4-202ENST00000357388 LIPCP11150 499 aa12□□□□□ -0.49
SMC4-202ENST00000357388 SHC2P98077 582 aa12□□□□□ -0.49
SMC4-202ENST00000357388 PRAMEF8Q5VWM4 474 aa12□□□□□ -0.49
SMC4-202ENST00000357388 PRAMEF7Q5VXH5 474 aa12□□□□□ -0.49
SMC4-202ENST00000357388 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
SMC4-202ENST00000357388 FBXO27Q8NI29 283 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms