RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 ACTRT3Q9BYD9 372 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 OR5V1Q9UGF6 321 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ATG4BQ9Y4P1 393 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 FXYD6-FXYD2A0A087WZ82 144 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 IGKV1-8A0A0C4DH67 115 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 A0A0G2JN53 185 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 TRAPPC13A5PLN9 417 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 CHURC1-FNTBB4DL54 471 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 ZNF879B4DU55 563 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 LEFTY2O00292 366 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 SIGLEC5O15389 551 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 KDM4BO94953 1096 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 CALCBP10092 127 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 F3P13726 295 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 MGMTP16455 207 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 NDUFS1P28331 727 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 HSD17B2P37059 387 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 MC3RP41968 323 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 SSR2P43308 183 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 ART1P52961 327 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 ACTA2P62736 377 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 ACTG2P63267 376 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 SIGLEC14Q08ET2 396 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 FHL1Q13642 323 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 CRMP1Q14194 572 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 TMEM35AQ53FP2 167 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 SLC48A1Q6P1K1 146 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 FBXO46Q6PJ61 603 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 UBE2Q1Q7Z7E8 422 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 BPIFCQ8NFQ6 507 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 TMEM239Q8WW34 195 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 MYLIPQ8WY64 445 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 C12orf57Q99622 126 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 SLC19A3Q9BZV2 496 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 FXYD6Q9H0Q3 95 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 RSPH9Q9H1X1 276 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 MTHFD2LQ9H903 347 aaPredicted RBP11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 NOX4Q9NPH5 578 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 PRDM7Q9NQW5 492 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 MRTO4Q9UKD2 239 aaKnown RBP11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 PLCL2Q9UPR0 1127 aa11.15□□□□□ -0.63
SMARCAL1-201ENST00000357276 RFPL4AA6NLU0 287 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RFPL4AL1F8VTS6 287 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR1F1O43749 312 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 CTNSO60931 367 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 UBBP0CG47 229 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 UBCP0CG48 685 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 NAT2P11245 290 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 PTNP21246 168 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RPS27AP62979 156 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 UBA52P62987 128 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 HES5Q5TA89 166 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR5K2Q8NHB8 316 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 C15orf40Q8WUR7 153 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RNF166Q96A37 237 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 MIB2Q96AX9 1013 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 S100A16Q96FQ6 103 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 KLHL31Q9H511 634 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 IL36AQ9UHA7 158 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 TET1Q8NFU7 2136 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 TRAV14DV4A0A0A6YYC5 116 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 GPRIN2O60269 458 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 ERAL1O75616 437 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 AIFM1O95831 613 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR2T7P0C7T2 308 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RPS4Y1P22090 263 aaKnown RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 CDK2P24941 298 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 MC2RQ01718 297 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 DUSP8Q13202 625 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 SLC9A5Q14940 896 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 ZNF765Q7L2R6 523 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 TMEM25Q86YD3 366 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 MUC20Q8N307 709 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RELL2Q8NC24 303 aaPredicted RBP11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR10K1Q8NGX5 313 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR2T27Q8NH04 317 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 SYNPRQ8TBG9 265 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 POT1Q9NUX5 634 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 EPHA6Q9UF33 1036 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 LRFN2Q9ULH4 789 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 MYO10Q9HD67 2058 aa11.14□□□□□ -0.63
SMARCAL1-201ENST00000357276 RIIAD1A6NNX1 92 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 F8W036 122 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 KPNA3O00505 521 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 SPDEFO95238 335 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 THBS1P07996 1170 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 LAG3P18627 525 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 CSRP1P21291 193 aaKnown RBP11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 ZNF528Q3MIS6 628 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TMEM69Q5SWH9 247 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 TMEM17Q86X19 198 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 SERPINA12Q8IW75 414 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 OR6N1Q8NGY5 312 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 LRIG1Q96JA1 1093 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 C1orf198Q9H425 327 aa11.13□□□□□ -0.63
SMARCAL1-201ENST00000357276 ACTR10Q9NZ32 417 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms