RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CD74P04233 296 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 ITGA5P08648 1049 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 CCL23P55773 120 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 CACNG1Q06432 222 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 DDX39BQ13838 428 aaKnown RBP14.54□□□□□ -0.08
RTN3-205ENST00000356000 ARHGEF7Q14155 803 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 C11orf87Q6NUJ2 197 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 FIGNL1Q6PIW4 674 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 ARL9Q6T311 187 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 REPS2Q8NFH8 660 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 OR51S1Q8NGJ8 323 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 OR5W2Q8NH69 310 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 LGALS14Q8TCE9 139 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 TIMP4Q99727 224 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 CACFD1Q9UGQ2 172 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 TRAV1-2A0A0B4J238 106 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 OR5H14A6NHG9 310 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 F5H0A9 414 aaPredicted RBP14.53□□□□□ -0.08
RTN3-205ENST00000356000 J3QRE1 110 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 SULT2B1O00204 365 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 TAF6P49848 677 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 CAV2P51636 162 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 SLC26A5P58743 744 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 MAP2K5Q13163 448 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 C1orf94Q6P1W5 598 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 PRSS35Q8N3Z0 413 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 OR10D4PQ8NGN7 298 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 SLC25A38Q96DW6 304 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 LRIG1Q96JA1 1093 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 UBQLN3Q9H347 655 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 EGLN3Q9H6Z9 239 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 CRLF2Q9HC73 371 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 ZNF230Q9UIE0 474 aaPredicted RBP14.53□□□□□ -0.08
RTN3-205ENST00000356000 OR2AT4A6NND4 320 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 RNASEK-C17orf49H0YIS7 233 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 PNPLA4P41247 253 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 TMEM115Q12893 351 aaPredicted RBP14.53□□□□□ -0.08
RTN3-205ENST00000356000 ALG11Q2TAA5 492 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 HENMT1Q5T8I9 393 aaKnown RBP14.53□□□□□ -0.08
RTN3-205ENST00000356000 METTL7BQ6UX53 244 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 PLPPR4Q7Z2D5 763 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 RBM45Q8IUH3 476 aaKnown RBP14.53□□□□□ -0.08
RTN3-205ENST00000356000 OR4K5Q8NGD3 323 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 OR56A3Q8NH54 315 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 ISOC2Q96AB3 205 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 R3HDM4Q96D70 268 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 MED8Q96G25 268 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 LRFN5Q96NI6 719 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 RSPO3Q9BXY4 272 aaPredicted RBP14.53□□□□□ -0.08
RTN3-205ENST00000356000 TRIM36Q9NQ86 728 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 SIRT7Q9NRC8 400 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 ZDHHC8Q9ULC8 765 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 HS3ST4Q9Y661 456 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 LCTP09848 1927 aa14.53□□□□□ -0.08
RTN3-205ENST00000356000 UGDHO60701 494 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 RLN1P04808 185 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 GSTM3P21266 225 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 LPOP22079 712 aaPredicted RBP14.52□□□□□ -0.08
RTN3-205ENST00000356000 DGKAP23743 735 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 DLSTP36957 453 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 ACVRL1P37023 503 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 CASRP41180 1078 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 MRPS10P82664 201 aaKnown RBP14.52□□□□□ -0.08
RTN3-205ENST00000356000 NDUFAF6Q330K2 333 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 POMZP3Q6PJE2 187 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 TMPRSS11BQ86T26 416 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 BEND2Q8NDZ0 799 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 PPCDCQ96CD2 204 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 SMOC1Q9H4F8 434 aa14.52□□□□□ -0.08
RTN3-205ENST00000356000 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 A0A1W2PRQ8 180 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 MFNGO00587 321 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 HTR1FP30939 366 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 ATP6V1E1P36543 226 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 PTH2RP49190 550 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 HTRA4P83105 476 aaPredicted RBP14.52□□□□□ -0.09
RTN3-205ENST00000356000 SRSF4Q08170 494 aaKnown RBP14.52□□□□□ -0.09
RTN3-205ENST00000356000 CLN3Q13286 438 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 RPE65Q16518 533 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 RNASE10Q5GAN6 216 aaKnown RBP14.52□□□□□ -0.09
RTN3-205ENST00000356000 REEP3Q6NUK4 255 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 FAM199XQ6PEV8 388 aaPredicted RBP14.52□□□□□ -0.09
RTN3-205ENST00000356000 TDHQ8IZJ6 230 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 LINC00471Q8N535 108 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 TOP6BLQ8N6T0 577 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 OR5AP2Q8NGF4 316 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 OR56B1Q8NGI3 324 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 ZNF671Q8TAW3 534 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 LINC01599Q8WXQ3 324 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 CIPCQ9C0C6 399 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 NRSN2Q9GZP1 204 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 MCM3APO60318 1980 aa14.52□□□□□ -0.09
RTN3-205ENST00000356000 F10P00742 488 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 OR8G3PP0DMU2 310 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 ADH7P40394 386 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 P2RX1P51575 399 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 RAP1AP62834 184 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 KIAA0141Q14154 515 aaPredicted RBP14.51□□□□□ -0.09
RTN3-205ENST00000356000 ACSM3Q53FZ2 586 aa14.51□□□□□ -0.09
RTN3-205ENST00000356000 FAM83HQ6ZRV2 1179 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms